rs8176318

This is a downstream gene variant variant in the BRCA1 gene.

ClinVar annotation

Benign★★★★
6 submitters2 publications

Breast-ovarian cancer, familial, susceptibility to, 1 (BROVCA1); Hereditary breast ovarian cancer syndrome; not specified

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Research that mentions this SNP (1)

Single nucleotide polymorphisms within MicroRNAs, MicroRNA targets, and MicroRNA biogenesis genes and their impact on colorectal cancer survival
AssociationN=2,288Lila E. Mullany et al.(2017)· Genes, Chromosomes and Cancer

A candidate gene study of 1115 colorectal cancer cases and 1173 controls examined associations between 565 SNPs in microRNA genes, miRNA target genes, and miRNA biogenesis genes with colorectal cancer survival. Seven SNPs remained significantly associated with survival after multiple comparison adjustment: rs12140 (ADAMTS1, HRR=0.44, protective), and six SNPs associated with increased mortality risk including rs6598964 (LIN28A, HRR=2.26) which paradoxically decreased cancer risk (OR=0.77) but increased mortality. Five SNPs were also associated with altered mRNA expression levels.

Traits studied:Colorectal cancer riskColorectal cancer survivalmRNA expression

About BRCA1

This gene encodes a 190 kD nuclear phosphoprotein that plays a role in maintaining genomic stability, and it also acts as a tumor suppressor. The BRCA1 gene contains 22 exons spanning about 110 kb of DNA. The encoded protein combines with other tumor suppressors, DNA damage sensors, and signal transducers to form a large multi-subunit protein complex known as the BRCA1-associated genome surveillance complex (BASC). This gene product associates with RNA polymerase II, and through the C-terminal domain, also interacts with histone deacetylase complexes. This protein thus plays a role in transcription, DNA repair of double-stranded breaks, and recombination. Mutations in this gene are responsible for approximately 40% of inherited breast cancers and more than 80% of inherited breast and ovarian cancers. Alternative splicing plays a role in modulating the subcellular localization and physiological function of this gene. Many alternatively spliced transcript variants, some of which are disease-associated mutations, have been described for this gene, but the full-length natures of only some of these variants has been described. A related pseudogene, which is also located on chromosome 17, has been identified. [provided by RefSeq, May 2020]

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Gene information from NCBI Gene. Variant classifications from ClinVar.

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