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Polygenic Risk Scores — EXPERIMENTAL — currently has known issues!!

Ancestry Context

Selected Ancestry (used for PRS)

EUREuropean

Estimated Ancestry (computed)

98% European

PRS scores are calibrated against reference distributions from the selected ancestry group.

Type 2 diabetes (T2D)

PGS000031AUC 0.9162 variantsPubMedDOI

2.9× higher risk than average

Of people with your genetics,

67.5%

do not have trait

32.5%

have trait

In the general population,

88.7%

do not have trait

11.3%

have trait

Population prevalence: CDC National Diabetes Statistics Report 2022: 11.3% of US adults. Source

Normalized against 1000 Genomes European. 92nd percentile. Raw score: 6.372.

Alzheimer's disease

Normalized against 1000 Genomes European. 87th percentile. Raw score: 5.516.

Alzheimer's disease

PGS004590AUC 0.68362 variantsPubMedDOI

1.1× higher risk than average

Of people with your genetics,

87.8%

do not have trait

12.2%

have trait

In the general population,

89.3%

do not have trait

10.7%

have trait

Population prevalence: Alzheimer's Association 2024: 10.7% of Americans aged 65+ have Alzheimer's. Source

Normalized against 1000 Genomes European. 75th percentile. Raw score: -2.892.

Alzheimer's disease

PGS004008AUC 0.615,662 variantsPubMedDOI

1.0× higher risk than average

Of people with your genetics,

88.9%

do not have trait

11.1%

have trait

In the general population,

89.3%

do not have trait

10.7%

have trait

Population prevalence: Alzheimer's Association 2024: 10.7% of Americans aged 65+ have Alzheimer's. Source

Normalized against 1000 Genomes European. 68th percentile. Raw score: -0.1597.

Alzheimer's disease

PGS003992AUC 0.581,136,108 variantsPubMedDOI

1.1× higher risk than average

Of people with your genetics,

88.3%

do not have trait

11.7%

have trait

In the general population,

89.3%

do not have trait

10.7%

have trait

Population prevalence: Alzheimer's Association 2024: 10.7% of Americans aged 65+ have Alzheimer's. Source

Normalized against 1000 Genomes European. 67th percentile. Raw score: 0.04630.

ER-positive breast cancer

PGS000002AUC 0.6177 variantsPubMedDOI

1.1× higher risk than average

Of people with your genetics,

85.8%

do not have trait

14.2%

have trait

In the general population,

86.8%

do not have trait

13.2%

have trait

Population prevalence: NCI SEER: 13.2% lifetime risk of female breast cancer (2018-2020 data). Source

Normalized against 1000 Genomes European. 64th percentile. Raw score: 0.6435.

Alzheimer's disease

PGS0042288,861 variantsPubMedDOI
Normalized against 1000 Genomes European. 62nd percentile. Raw score: -20.01.

Breast cancer

PGS000001AUC 0.6377 variantsPubMedDOI

1.0× lower risk than average

Of people with your genetics,

87.4%

do not have trait

12.6%

have trait

In the general population,

86.8%

do not have trait

13.2%

have trait

Population prevalence: NCI SEER: 13.2% lifetime risk of female breast cancer (2018-2020 data). Source

Normalized against 1000 Genomes European. 52nd percentile. Raw score: 0.5079.

Standing height

PGS003514979,739 variantsDOI
Normalized against 1000 Genomes European. 45th percentile. Raw score: 3.847.

All-cause dementia

PGS005170AUC 0.761,320,050 variantsPubMedDOI

1.9× lower risk than average

Of people with your genetics,

94.3%

do not have trait

5.7%

have trait

In the general population,

89.3%

do not have trait

10.7%

have trait

Population prevalence: Alzheimer's Association 2024: 10.7% of Americans aged 65+ have Alzheimer's/dementia. Source

Normalized against 1000 Genomes European. 33rd percentile. Raw score: 2.400.

Alzheimer's disease

PGS0027531,091,909 variantsPubMedDOI
Normalized against 1000 Genomes European. 31st percentile. Raw score: -0.3208.

Alzheimer's disease

PGS002249249,248 variantsPubMedDOI
Normalized against 1000 Genomes European. 27th percentile. Raw score: 119.4.

Dementia

PGS00203539,751 variantsPubMedDOI
Normalized against 1000 Genomes European. 8th percentile. Raw score: -0.0003671.

Prostate cancer

PGS000662AUC 0.83269 variantsPubMedDOI

13.5× lower risk than average

Of people with your genetics,

99.1%

do not have trait

0.9%

have trait

In the general population,

87.2%

do not have trait

12.8%

have trait

Population prevalence: NCI SEER: 12.8% lifetime risk of prostate cancer (2018-2020 data). Source

Normalized against 1000 Genomes European. 8th percentile. Raw score: 21.76.

ER-negative breast cancer

PGS000003AUC 0.5877 variantsPubMedDOI

1.5× lower risk than average

Of people with your genetics,

91.4%

do not have trait

8.6%

have trait

In the general population,

86.8%

do not have trait

13.2%

have trait

Population prevalence: NCI SEER: 13.2% lifetime risk of female breast cancer (2018-2020 data). Source

Normalized against 1000 Genomes European. 7th percentile. Raw score: -0.1201.

Coronary artery disease

PGS000018AUC 0.791,745,017 variantsPubMedDOI

16.7× lower risk than average

Of people with your genetics,

99.6%

do not have trait

0.4%

have trait

In the general population,

93.5%

do not have trait

6.5%

have trait

Population prevalence: CDC NHANES 2017-2020: 6.5% of US adults aged 20+ have CHD. Source

Normalized against 1000 Genomes European. 2nd percentile. Raw score: -1.451.

Ischemic stroke

PGS000039AUC 0.643,225,164 variantsPubMedDOI

5.5× lower risk than average

Of people with your genetics,

99.5%

do not have trait

0.5%

have trait

In the general population,

97.0%

do not have trait

3.0%

have trait

Population prevalence: AHA 2023: ~3.0% of US adults have had a stroke. Source

Normalized against 1000 Genomes European. <1st percentile. Raw score: 1.626.
IDTraitVariantsRaw ScorePercentile
PGS000031Type 2 diabetes (T2D)626.37292
PGS002280Alzheimer's disease835.51687
PGS004590Alzheimer's disease362-2.89275
PGS004008Alzheimer's disease5,662-0.159768
PGS003992Alzheimer's disease1,136,1080.0463067
PGS000002ER-positive breast cancer770.643564
PGS004228Alzheimer's disease8,861-20.0162
PGS000001Breast cancer770.507952
PGS003514Standing height979,7393.84745
PGS005170All-cause dementia1,320,0502.40033
PGS002753Alzheimer's disease1,091,909-0.320831
PGS002249Alzheimer's disease249,248119.427
PGS002035Dementia39,751-0.00036718
PGS000662Prostate cancer26921.768
PGS000003ER-negative breast cancer77-0.12017
PGS000018Coronary artery disease1,745,017-1.4512
PGS000039Ischemic stroke3,225,1641.626<1

What is a polygenic risk score?

A polygenic risk score (PRS) combines the effects of many genetic variants to estimate your relative risk for a trait or disease. Each variant contributes a small amount — the PRS aggregates thousands of these effects into a single number.

Gene Wizard uses scores from the PGS Catalog, the largest open database of published polygenic scores, and normalizes your result against reference populations so you can see where you fall.