CNOT3

CCR4-NOT transcription complex subunit 3

Summary

Involved in regulation of stem cell population maintenance. Part of CCR4-NOT complex. [provided by Alliance of Genome Resources, Jul 2025]

Known Variants232 total

rsid	Position (GRCh37)	Alleles	Class	ClinVar
rs112921182	19:54,640,804	T/C	—	—
rs3810242	19:54,643,414	G/T	upstream gene variant	—
rs36639	19:54,644,288	A/T	—	—
rs36637	19:54,644,550	C/G	upstream gene variant	—
rs36636	19:54,644,879	G/A	upstream gene variant	—
rs111692608	19:54,646,656	T/G	—	uncertain significance
rs150786079	19:54,646,666	G/A	—	benign
rs181011894	19:54,646,743	C/T	—	likely benign
rs138664639	19:54,646,886	C/T	—	likely benign
rs2074521998	19:54,646,922	G/A	—	likely pathogenic
rs2517171338	19:54,646,926	C/T	—	uncertain significance
rs368416762	19:54,646,935	A/G	—	benign
rs2517243813	19:54,647,175	C/G	—	uncertain significance
rs2074539266	19:54,647,180	C/T	—	likely benign
rs148887462	19:54,647,198	G/A	—	likely benign
rs1160530445	19:54,647,221	C/G	—	uncertain significance
rs2517258542	19:54,647,237	G/T	—	uncertain significance
rs2074547544	19:54,647,396	C/T	—	pathogenic
rs2517280109	19:54,647,401	G/A	—	likely benign
rs36041696	19:54,647,428	G/A	—	likely benign
rs148048226	19:54,647,434	C/T	—	likely benign
rs776162140	19:54,647,440	C/A	—	likely benign
rs2517294280	19:54,647,468	C/A	—	likely pathogenic
rs191793595	19:54,647,503	G/A	—	benign
rs2517336865	19:54,647,724	C/T	—	likely benign
rs2517346791	19:54,647,794	G/A	—	conflicting classifications of pathogenicity
rs143820433	19:54,647,879	G/T	—	benign
rs757433086	19:54,647,960	C/T	—	likely benign
rs746132992	19:54,647,967	C/T	—	uncertain significance
rs147131517	19:54,647,981	C/T	—	likely benign
rs2517381711	19:54,647,988	C/T	—	uncertain significance
rs142741743	19:54,648,002	G/A	—	likely benign
rs2517384448	19:54,648,013	A/C	—	uncertain significance
rs1264460935	19:54,648,021	G/T	—	uncertain significance
rs147391222	19:54,648,023	G/A	—	likely benign
rs2517391941	19:54,648,046	G/T	—	uncertain significance
rs139874376	19:54,648,059	C/T	—	benign
rs2517397124	19:54,648,073	G/A	—	likely benign
rs141089891	19:54,648,085	C/T	—	benign
rs761899974	19:54,649,315	G/A	—	likely benign
rs767574789	19:54,649,326	G/T	—	uncertain significance
rs371650779	19:54,649,339	G/A	—	likely benign
rs2074633860	19:54,649,361	C/T	—	uncertain significance
rs754139680	19:54,649,362	G/A	—	uncertain significance
rs755267492	19:54,649,369	C/T	—	likely benign
rs1238165628	19:54,649,370	G/A	—	conflicting classifications of pathogenicity
rs149814896	19:54,649,387	C/T	—	likely benign
rs2517520941	19:54,649,394	A/G	—	uncertain significance
rs2517522931	19:54,649,407	T/C	—	uncertain significance
rs2146595208	19:54,649,409	C/G	—	uncertain significance
rs200727273	19:54,649,411	G/C	—	likely benign
rs2146595244	19:54,649,413	G/A	—	conflicting classifications of pathogenicity
rs2146595285	19:54,649,425	A/G	—	likely pathogenic
rs144796513	19:54,649,444	C/T	—	likely benign
rs1293538013	19:54,649,452	G/A	—	uncertain significance
rs2074638284	19:54,649,493	C/T	—	likely pathogenic
rs34936413	19:54,649,501	C/T	—	benign
rs35511193	19:54,649,507	C/T	—	likely benign
rs1425427754	19:54,649,508	G/A	—	uncertain significance
rs2517545401	19:54,649,522	T/G	—	uncertain significance
rs765395773	19:54,649,543	C/T	—	benign
rs112551303	19:54,649,569	T/C	—	benign
rs73936620	19:54,649,571	A/G	—	benign
rs201428907	19:54,649,573	C/T	—	benign
rs2074647020	19:54,649,638	C/T	—	likely benign
rs1388870979	19:54,649,641	C/A	—	likely benign
rs767913658	19:54,649,652	C/T	—	conflicting classifications of pathogenicity
rs200821584	19:54,649,653	G/A	—	likely benign
rs778684787	19:54,649,660	G/A	—	uncertain significance
rs746793484	19:54,649,668	C/A	—	likely benign
rs36665	19:54,649,671	T/T	—	uncertain significance
rs769899630	19:54,649,672	C/G	—	uncertain significance
rs764309033	19:54,649,673	C/T	—	uncertain significance
rs762116071	19:54,649,674	C/A	—	likely benign
rs2517595954	19:54,649,708	C/T	—	pathogenic
rs751333148	19:54,649,722	G/A	—	likely benign
rs2074652352	19:54,649,736	C/T	—	uncertain significance
rs373868033	19:54,649,742	G/A	—	uncertain significance
rs150342696	19:54,649,761	C/T	—	likely benign
rs768826017	19:54,649,778	C/T	—	uncertain significance
rs754659364	19:54,649,792	G/A	—	likely benign
rs201212915	19:54,650,327	C/G	—	likely benign
rs2074686379	19:54,650,371	C/A	—	uncertain significance
rs2517699553	19:54,650,381	T/G	—	uncertain significance
rs201797045	19:54,650,412	C/T	—	benign
rs36663	19:54,651,333	G/A	—	—
rs368877712	19:54,651,877	C/A	—	likely benign
rs767027855	19:54,651,879	G/T	—	likely benign
rs2517926118	19:54,651,895	A/C	—	uncertain significance
rs149108037	19:54,651,898	G/A	—	conflicting classifications of pathogenicity
rs2517929301	19:54,651,901	T/A	—	uncertain significance
rs766226888	19:54,651,917	G/A	—	conflicting classifications of pathogenicity
rs587744329	19:54,651,925	C/T	—	conflicting classifications of pathogenicity
rs146219248	19:54,651,927	C/T	—	likely benign
rs138658963	19:54,651,928	C/T	—	likely benign
rs2517946260	19:54,651,931	C/G	—	uncertain significance
rs190206269	19:54,651,947	C/T	—	uncertain significance
rs370792103	19:54,651,963	C/T	—	likely benign
rs372481652	19:54,651,971	C/T	—	conflicting classifications of pathogenicity
rs2517982380	19:54,651,988	T/G	—	uncertain significance

Showing 100 of 232 variants. Use the SNP search for the full list.

Gene information from NCBI Gene. Variant classifications from ClinVar.