LRRN1
leucine rich repeat neuronal 1
Summary
Predicted to act upstream of or within positive regulation of synapse assembly. Predicted to be located in membrane. Predicted to be active in extracellular matrix and extracellular space. Biomarker of stomach cancer. [provided by Alliance of Genome Resources, Jul 2025]
Known Variants49 total
| rsid | Position (GRCh37) | Alleles | Class | ClinVar |
|---|---|---|---|---|
| rs112091613 | 3:3,840,749 | C/T | regulatory region variant | — |
| rs150603440 | 3:3,853,376 | G/A | intron variant | — |
| rs567424316 | 3:3,861,529 | G/A | — | — |
| rs115878757 | 3:3,863,700 | T/C | regulatory region variant | — |
| rs114375669 | 3:3,875,095 | C/T | intron variant | — |
| rs187067536 | 3:3,875,409 | G/A | intron variant | — |
| rs763731345 | 3:3,886,415 | T/C | — | likely benign |
| rs1336468436 | 3:3,886,418 | G/C | — | uncertain significance |
| rs187548325 | 3:3,886,501 | A/G | — | uncertain significance |
| rs751390851 | 3:3,886,612 | A/C | — | uncertain significance |
| rs3749350 | 3:3,886,721 | C/A | — | benign |
| rs762549069 | 3:3,886,776 | A/C | — | uncertain significance |
| rs113168029 | 3:3,886,784 | C/T | — | benign |
| rs185651454 | 3:3,886,806 | C/A | — | likely benign |
| rs371825663 | 3:3,886,815 | G/T | — | likely benign |
| rs1559312857 | 3:3,886,896 | C/T | — | uncertain significance |
| rs1350279122 | 3:3,886,914 | A/C | — | uncertain significance |
| rs1267054939 | 3:3,886,948 | A/T | — | uncertain significance |
| rs146393338 | 3:3,887,155 | A/G | — | uncertain significance |
| rs1182164078 | 3:3,887,183 | G/A | — | uncertain significance |
| rs375411802 | 3:3,887,242 | A/G | — | uncertain significance |
| rs772303652 | 3:3,887,273 | G/C | — | uncertain significance |
| rs142045330 | 3:3,887,309 | C/T | — | likely benign |
| rs146290783 | 3:3,887,313 | C/G | — | uncertain significance |
| rs200294045 | 3:3,887,415 | C/T | — | uncertain significance |
| rs1575305389 | 3:3,887,477 | C/T | — | likely benign |
| rs145675446 | 3:3,887,485 | C/T | — | uncertain significance |
| rs978585328 | 3:3,887,532 | C/T | — | uncertain significance |
| rs113247781 | 3:3,887,534 | C/T | — | likely benign |
| rs145668532 | 3:3,887,546 | G/A | — | likely benign |
| rs577361491 | 3:3,887,580 | A/G | — | likely benign |
| rs150112373 | 3:3,887,598 | A/G | — | uncertain significance |
| rs115354749 | 3:3,887,633 | C/T | — | benign |
| rs373184552 | 3:3,887,710 | C/T | — | uncertain significance |
| rs543878366 | 3:3,887,766 | G/A | — | uncertain significance |
| rs911678984 | 3:3,887,836 | T/A | — | uncertain significance |
| rs147499906 | 3:3,887,854 | G/A | — | uncertain significance |
| rs200558579 | 3:3,887,901 | G/T | — | uncertain significance |
| rs144158765 | 3:3,887,968 | A/G | — | uncertain significance |
| rs114810202 | 3:3,887,972 | T/C | — | benign |
| rs145686073 | 3:3,887,977 | C/A | — | uncertain significance |
| rs774103125 | 3:3,887,995 | C/T | — | uncertain significance |
| rs1000142493 | 3:3,888,006 | A/G | — | uncertain significance |
| rs199691811 | 3:3,888,124 | A/G | — | uncertain significance |
| rs34745501 | 3:3,888,152 | C/T | — | benign |
| rs150535895 | 3:3,888,177 | G/T | — | uncertain significance |
| rs2469928999 | 3:3,888,296 | G/C | — | uncertain significance |
| rs142141109 | 3:3,888,392 | A/T | — | likely benign |
| rs34611357 | 3:3,888,429 | A/C | — | benign |
Gene information from NCBI Gene. Variant classifications from ClinVar.