NLGN2

neuroligin 2

Summary

This gene encodes a member of a family of neuronal cell surface proteins. Members of this family may act as splice site-specific ligands for beta-neurexins and may be involved in the formation and remodeling of central nervous system synapses. [provided by RefSeq, Jul 2008]

Known Variants116 total

rsidPosition (GRCh37)AllelesClassClinVar
rs88603979517:7,306,462——pathogenic
rs13955286117:7,307,391C/Gmissense variant—
rs3538649017:7,310,006T/Cupstream gene variant—
rs76701116517:7,311,652G/A—likely benign
rs131443066417:7,311,658C/T—likely benign
rs190674225917:7,311,711C/T—uncertain significance
rs130615164017:7,311,723G/A—uncertain significance
rs37769073717:7,311,738G/T—uncertain significance
rs18255780117:7,311,802G/A—benign
rs119695156917:7,311,815G/A—uncertain significance
rs123676035517:7,311,819G/A—uncertain significance
rs250771595517:7,311,858G/A—uncertain significance
rs77647231417:7,311,868C/T—likely benign
rs56130922517:7,311,902C/T—likely benign
rs108530747317:7,311,947G/A—uncertain significance
rs250771680817:7,311,982C/G—uncertain significance
rs74622284317:7,311,983C/T—uncertain significance
rs14790216617:7,312,040G/A—benign
rs76631395917:7,312,041C/T—likely benign
rs36840291817:7,315,479C/T—uncertain significance
rs37142340617:7,315,503C/T—uncertain significance
rs15020717617:7,315,516G/A—likely benign
rs20191732617:7,317,669G/A—conflicting classifications of pathogenicity
rs215081596817:7,317,714C/T—uncertain significance
rs13872668017:7,317,727G/A—likely benign
rs123059909517:7,317,798G/A—uncertain significance
rs56701027917:7,317,995C/G—likely benign
rs7835538117:7,318,061C/T—benign
rs250773866817:7,318,101A/G—uncertain significance
rs37321597317:7,318,115C/T—likely benign
rs159771205017:7,318,124G/A—likely benign
rs77232942317:7,318,177G/A—likely benign
rs250773916517:7,318,187C/G—likely benign
rs53665626017:7,318,270G/T—likely benign
rs137418043917:7,318,295G/A—uncertain significance
rs77358544817:7,318,309C/T—likely benign
rs75058966217:7,318,354G/A—likely benign
rs250774019517:7,318,388G/T—uncertain significance
rs224123317:7,318,396T/C—benign
rs54392679017:7,318,397G/A—uncertain significance
rs77685183617:7,318,453C/T—likely benign
rs77965501117:7,318,825C/T—benign
rs96816716217:7,318,876G/T—uncertain significance
rs11699059817:7,318,920C/T—benign
rs75401218417:7,318,921G/A—uncertain significance
rs1294701717:7,318,935T/C—benign
rs250774339717:7,318,945G/A—uncertain significance
rs250774360017:7,318,970A/G—uncertain significance
rs14443488317:7,319,028C/G—uncertain significance
rs250774420817:7,319,059G/C—uncertain significance
rs215081702317:7,319,106G/A—uncertain significance
rs14563322517:7,319,124C/T—likely benign
rs250774479917:7,319,135G/A—uncertain significance
rs75241202617:7,319,205C/T—likely benign
rs76329028717:7,319,221C/T—uncertain significance
rs53659727817:7,319,224G/A—uncertain significance
rs36994947617:7,319,258C/T—uncertain significance
rs37568520217:7,319,259G/A—likely benign
rs215081719717:7,319,276G/T—uncertain significance
rs7673319017:7,319,325T/C—benign
rs14048994117:7,319,335G/A—uncertain significance
rs14545635117:7,319,373C/T—benign
rs190708984717:7,319,417C/T—uncertain significance
rs76456784917:7,320,260G/A—likely benign
rs13818785717:7,320,266G/A—likely benign
rs54383228417:7,320,375G/A—uncertain significance
rs14401966717:7,320,438A/G—uncertain significance
rs76260561817:7,320,445A/G—uncertain significance
rs98215424117:7,320,448C/A—uncertain significance
rs75864328317:7,320,485C/T—likely benign
rs77701058417:7,320,493G/A—uncertain significance
rs14118647217:7,320,500G/A—benign
rs75845853617:7,320,524G/A—likely benign
rs55955814017:7,320,532G/C—uncertain significance
rs20043806417:7,320,534C/T—likely benign
rs77818084217:7,320,544C/T—uncertain significance
rs76183968817:7,320,570G/A—uncertain significance
rs122373359517:7,320,573C/A—uncertain significance
rs75517902817:7,320,575C/T—likely benign
rs7808108017:7,320,581T/C—benign
rs37167226717:7,320,601G/A—uncertain significance
rs77648777117:7,320,626C/T—likely benign
rs20197297717:7,320,631C/T—uncertain significance
rs250775331817:7,320,635G/A—likely benign
rs13940743017:7,320,731G/T—likely benign
rs77556364017:7,320,733G/A—uncertain significance
rs75412151417:7,320,745T/C—uncertain significance
rs14567326817:7,320,758C/G—likely benign
rs77554722017:7,320,803C/T—likely benign
rs124040914917:7,320,807G/A—uncertain significance
rs56953152717:7,320,811G/A—uncertain significance
rs215081862717:7,320,841C/T—uncertain significance
rs75107853617:7,320,867G/T—uncertain significance
rs20152350117:7,320,870G/A—benign
rs6206117417:7,320,874C/T—benign
rs74914867717:7,320,878C/T—likely benign
rs140547651017:7,320,879C/T—uncertain significance
rs250775572217:7,320,883C/A—uncertain significance
rs37053519817:7,320,884C/G—likely benign
rs130846649817:7,320,907C/T—uncertain significance

Showing 100 of 116 variants. Use the SNP search for the full list.

Gene information from NCBI Gene. Variant classifications from ClinVar.