POGZ

pogo transposable element derived with ZNF domain

Summary

The protein encoded by this gene appears to be a zinc finger protein containing a transposase domain at the C-terminus. This protein was found to interact with the transcription factor SP1 in a yeast two-hybrid system. Alternatively spliced transcript variants encoding distinct isoforms have been observed. [provided by RefSeq, Aug 2010]

Known Variants487 total

rsid	Position (GRCh37)	Alleles	Class	ClinVar
rs6667714	1:151,377,248	T/C	—	benign
rs1383396839	1:151,377,281	A/T	—	likely benign
rs2529189605	1:151,377,292	G/T	—	likely benign
rs1452048149	1:151,377,304	C/T	—	association
rs182719075	1:151,377,305	T/A	—	likely benign
rs776740035	1:151,377,309	T/A	—	conflicting classifications of pathogenicity
rs761846366	1:151,377,314	G/A	—	likely benign
rs2529190233	1:151,377,328	C/T	—	uncertain significance
rs2529190447	1:151,377,346	C/G	—	uncertain significance
rs1557861908	1:151,377,357	T/C	—	uncertain significance
rs2529190720	1:151,377,363	C/T	—	uncertain significance
rs141235383	1:151,377,376	T/C	—	conflicting classifications of pathogenicity
rs370498156	1:151,377,379	T/G	—	association
rs374207073	1:151,377,390	G/C	—	likely benign
rs2102139743	1:151,377,403	G/A	—	uncertain significance
rs1571294	1:151,377,407	A/T	—	likely benign
rs138705914	1:151,377,408	G/T	—	uncertain significance
rs1557862151	1:151,377,409	T/A	—	uncertain significance
rs35198305	1:151,377,416	C/A	—	benign
rs765408999	1:151,377,419	A/C	—	likely benign
rs142860188	1:151,377,422	A/C	—	likely benign
rs556553243	1:151,377,423	T/C	—	conflicting classifications of pathogenicity
rs2102140164	1:151,377,430	C/T	—	uncertain significance
rs756691187	1:151,377,469	C/G	—	association
rs778409159	1:151,377,485	A/C	—	uncertain significance
rs779620746	1:151,377,491	T/C	—	likely benign
rs2102140718	1:151,377,496	G/A	—	uncertain significance
rs1010981331	1:151,377,503	A/C	—	uncertain significance
rs768968029	1:151,377,504	A/G	—	uncertain significance
rs545762626	1:151,377,514	C/T	—	conflicting classifications of pathogenicity
rs769941353	1:151,377,515	G/A	—	likely benign
rs753752964	1:151,377,532	T/C	—	likely benign
rs200125187	1:151,377,536	C/T	—	likely benign
rs749911775	1:151,377,541	G/C	—	uncertain significance
rs755307314	1:151,377,580	C/T	—	likely benign
rs1557863033	1:151,377,597	A/C	—	uncertain significance
rs1220465341	1:151,377,603	A/C	—	uncertain significance
rs1557863070	1:151,377,604	C/A	—	uncertain significance
rs201722331	1:151,377,613	G/A	—	benign
rs1406104875	1:151,377,616	G/C	—	uncertain significance
rs774570324	1:151,377,624	A/G	—	benign
rs1484207450	1:151,377,631	A/G	—	uncertain significance
rs149655055	1:151,377,648	G/T	—	uncertain significance
rs2529195591	1:151,377,649	C/A	—	uncertain significance
rs762381513	1:151,377,658	G/A	—	uncertain significance
rs765820329	1:151,377,663	T/C	—	uncertain significance
rs869312834	1:151,377,664	G/A	stop gained	pathogenic
rs754614315	1:151,377,698	A/G	—	likely benign
rs1557863430	1:151,377,705	T/C	—	association
rs1653360833	1:151,377,708	A/T	—	uncertain significance
rs1557863440	1:151,377,709	T/C	—	association
rs1449109714	1:151,377,715	C/A	—	uncertain significance
rs555935933	1:151,377,722	T/C	—	likely benign
rs1557863546	1:151,377,739	T/A	—	association
rs2529197206	1:151,377,762	G/C	—	uncertain significance
rs2529197260	1:151,377,768	G/C	—	uncertain significance
rs2529197434	1:151,377,778	C/A	—	uncertain significance
rs2529197556	1:151,377,784	G/C	—	uncertain significance
rs2529197905	1:151,377,816	C/T	—	uncertain significance
rs866898562	1:151,377,817	G/A	—	conflicting classifications of pathogenicity
rs1034210154	1:151,377,832	C/T	—	uncertain significance
rs2529198059	1:151,377,836	C/T	—	uncertain significance
rs1571321552	1:151,377,839	G/A	—	benign
rs2529198140	1:151,377,840	C/T	—	uncertain significance
rs372063540	1:151,377,849	C/T	—	likely benign
rs769581210	1:151,377,852	T/C	—	association
rs201333468	1:151,377,865	G/A	—	likely benign
rs2529198715	1:151,377,867	T/C	—	uncertain significance
rs1571321748	1:151,377,873	C/T	—	likely pathogenic
rs2529198797	1:151,377,876	A/C	—	uncertain significance
rs2529198844	1:151,377,882	G/A	—	uncertain significance
rs529715904	1:151,377,883	T/C	—	uncertain significance
rs756483529	1:151,377,904	C/T	—	uncertain significance
rs2529199146	1:151,377,907	C/G	—	uncertain significance
rs757736540	1:151,377,913	T/G	—	uncertain significance
rs745915137	1:151,377,915	T/C	—	uncertain significance
rs773018705	1:151,377,937	G/C	—	likely benign
rs202098093	1:151,377,952	G/A	—	association
rs1042613899	1:151,377,971	C/G	—	uncertain significance
rs2529200122	1:151,377,983	G/T	—	likely pathogenic
rs372889416	1:151,378,031	G/T	—	likely benign
rs2529200620	1:151,378,043	C/T	—	likely pathogenic
rs781439025	1:151,378,051	C/T	—	uncertain significance
rs869320764	1:151,378,054	—	—	pathogenic
rs778651356	1:151,378,086	C/T	—	uncertain significance
rs773311942	1:151,378,087	G/A	—	pathogenic
rs2529201620	1:151,378,108	C/G	—	uncertain significance
rs1027902743	1:151,378,110	G/C	—	conflicting classifications of pathogenicity
rs1276388879	1:151,378,123	A/C	—	association
rs760211123	1:151,378,138	T/C	—	likely benign
rs377244597	1:151,378,139	A/C	—	likely benign
rs552090128	1:151,378,154	C/T	—	likely benign
rs2529202364	1:151,378,155	A/T	—	pathogenic
rs778792467	1:151,378,168	G/C	—	association
rs1259887848	1:151,378,174	G/C	—	uncertain significance
rs1191231647	1:151,378,177	T/C	—	uncertain significance
rs745753317	1:151,378,182	C/T	—	likely benign
rs375852736	1:151,378,198	T/C	—	likely benign
rs768284272	1:151,378,204	G/A	—	conflicting classifications of pathogenicity
rs116755407	1:151,378,214	C/T	—	likely benign

Showing 100 of 487 variants. Use the SNP search for the full list.

Gene information from NCBI Gene. Variant classifications from ClinVar.