PSMD1
proteasome 26S subunit, non-ATPase 1
Summary
The 26S proteasome is a multicatalytic proteinase complex with a highly ordered structure composed of 2 complexes, a 20S core and a 19S regulator. The 20S core is composed of 4 rings of 28 non-identical subunits; 2 rings are composed of 7 alpha subunits and 2 rings are composed of 7 beta subunits. The 19S regulator is composed of a base, which contains 6 ATPase subunits and 2 non-ATPase subunits, and a lid, which contains up to 10 non-ATPase subunits. Proteasomes are distributed throughout eukaryotic cells at a high concentration and cleave peptides in an ATP/ubiquitin-dependent process in a non-lysosomal pathway. An essential function of a modified proteasome, the immunoproteasome, is the processing of class I MHC peptides. This gene encodes the largest non-ATPase subunit of the 19S regulator lid, which is responsible for substrate recognition and binding. There is evidence that this proteasome and its subunits interact with viral proteins, including those of coronaviruses. Alternatively spliced transcript variants have been found for this gene.[provided by RefSeq, Aug 2020]
Known Variants26 total
| rsid | Position (GRCh37) | Alleles | Class | ClinVar |
|---|---|---|---|---|
| rs776542337 | 2:231,927,025 | G/A | — | uncertain significance |
| rs1261940510 | 2:231,927,387 | T/C | — | uncertain significance |
| rs1693924262 | 2:231,931,733 | C/T | — | uncertain significance |
| rs757019549 | 2:231,934,782 | T/C | — | uncertain significance |
| rs371110831 | 2:231,934,809 | G/A | — | uncertain significance |
| rs1469360415 | 2:231,934,815 | A/T | — | uncertain significance |
| rs147551981 | 2:231,936,983 | A/G | — | likely benign |
| rs2469365257 | 2:231,937,023 | C/A | — | uncertain significance |
| rs769695186 | 2:231,941,848 | C/T | — | uncertain significance |
| rs141191699 | 2:231,943,370 | C/T | — | benign |
| rs369229316 | 2:231,945,017 | G/A | — | uncertain significance |
| rs755107756 | 2:231,948,449 | C/T | — | uncertain significance |
| rs544006635 | 2:231,964,113 | A/G | — | — |
| rs2469482972 | 2:232,003,452 | C/G | — | uncertain significance |
| rs149050271 | 2:232,003,470 | G/A | — | uncertain significance |
| rs185969599 | 2:232,003,472 | G/A | — | uncertain significance |
| rs2469483110 | 2:232,003,560 | A/T | — | uncertain significance |
| rs757187868 | 2:232,018,306 | A/G | — | uncertain significance |
| rs2469502645 | 2:232,018,377 | G/A | — | uncertain significance |
| rs62193732 | 2:232,026,050 | A/G | — | likely benign |
| rs35852025 | 2:232,028,396 | A/G | — | benign |
| rs77967588 | 2:232,029,905 | T/C | — | benign |
| rs1382834746 | 2:232,030,613 | A/G | — | uncertain significance |
| rs780697471 | 2:232,030,700 | C/T | — | uncertain significance |
| rs148285878 | 2:232,035,286 | A/G | — | uncertain significance |
| rs747159926 | 2:232,035,316 | A/G | — | uncertain significance |
Gene information from NCBI Gene. Variant classifications from ClinVar.