RAET1E
retinoic acid early transcript 1E
Summary
This gene belong to the RAET1 family, which consists of major histocompatibility complex (MHC) class I-related genes located in a cluster on chromosome 6q24.2-q25.3. This and RAET1G protein differ from other RAET1 proteins in that they have type I membrane-spanning sequences at their C termini rather than glycosylphosphatidylinositol anchor sequences. This protein functions as a ligand for NKG2D receptor, which is expressed on the surface of several types of immune cells, and is involved in innate and adaptive immune responses. Alternatively spliced transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Aug 2011]
Known Variants19 total
| rsid | Position (GRCh37) | Alleles | Class | ClinVar |
|---|---|---|---|---|
| rs775190999 | 6:150,209,684 | A/C | — | uncertain significance |
| rs755662905 | 6:150,209,776 | T/G | — | uncertain significance |
| rs1164829141 | 6:150,209,788 | G/A | — | likely benign |
| rs201123268 | 6:150,210,544 | C/T | — | uncertain significance |
| rs1777773566 | 6:150,210,568 | A/T | — | uncertain significance |
| rs920136300 | 6:150,210,626 | A/C | — | uncertain significance |
| rs1340797434 | 6:150,210,641 | C/T | — | uncertain significance |
| rs143655455 | 6:150,210,652 | C/A | — | uncertain significance |
| rs778099649 | 6:150,210,678 | T/C | — | uncertain significance |
| rs201885603 | 6:150,210,711 | C/T | — | uncertain significance |
| rs138789042 | 6:150,210,712 | G/A | — | uncertain significance |
| rs1777804849 | 6:150,211,065 | A/G | — | uncertain significance |
| rs758548853 | 6:150,211,107 | C/A | — | uncertain significance |
| rs1181445354 | 6:150,211,119 | G/A | — | uncertain significance |
| rs1269331583 | 6:150,211,120 | C/A | — | uncertain significance |
| rs772624056 | 6:150,211,159 | T/A | — | uncertain significance |
| rs541250318 | 6:150,212,004 | G/A | — | uncertain significance |
| rs567051977 | 6:150,213,172 | C/T | — | — |
| rs555648964 | 6:150,219,180 | T/C | — | — |
Gene information from NCBI Gene. Variant classifications from ClinVar.