SIGLEC12
sialic acid binding Ig like lectin 12
Summary
Sialic acid-binding immunoglobulin-like lectins (SIGLECs) are a family of cell surface proteins belonging to the immunoglobulin superfamily. They mediate protein-carbohydrate interactions by selectively binding to different sialic acid moieties present on glycolipids and glycoproteins. This gene encodes a member of the SIGLEC3-like subfamily of SIGLECs. Members of this subfamily are characterized by an extracellular V-set immunoglobulin-like domain followed by two C2-set immunoglobulin-like domains, and the cytoplasmic tyrosine-based motifs ITIM and SLAM-like. The encoded protein, upon tyrosine phosphorylation, has been shown to recruit the Src homology 2 domain-containing protein-tyrosine phosphatases SHP1 and SHP2. It has been suggested that the protein is involved in the negative regulation of macrophage signaling by functioning as an inhibitory receptor. This gene is located in a cluster with other SIGLEC3-like genes on 19q13.4. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2013]
Known Variants62 total
| rsid | Position (GRCh37) | Alleles | Class | ClinVar |
|---|---|---|---|---|
| rs57043266 | 19:51,995,046 | G/T | — | uncertain significance |
| rs2513938322 | 19:51,995,077 | G/T | — | uncertain significance |
| rs1364652112 | 19:51,995,082 | C/A | — | uncertain significance |
| rs138399544 | 19:51,995,834 | C/T | downstream gene variant | — |
| rs12463092 | 19:51,998,336 | G/A | — | — |
| rs149927861 | 19:52,000,156 | G/A | — | uncertain significance |
| rs761150178 | 19:52,000,157 | C/T | — | uncertain significance |
| rs754150149 | 19:52,000,163 | C/T | — | uncertain significance |
| rs758515356 | 19:52,000,170 | C/T | — | uncertain significance |
| rs146234213 | 19:52,000,181 | C/T | — | uncertain significance |
| rs61743142 | 19:52,000,187 | C/T | — | uncertain significance |
| rs562574906 | 19:52,000,223 | A/G | — | uncertain significance |
| rs372383879 | 19:52,000,225 | C/T | — | uncertain significance |
| rs2513945629 | 19:52,000,620 | G/C | — | uncertain significance |
| rs1990270346 | 19:52,000,633 | A/G | — | uncertain significance |
| rs764988468 | 19:52,000,642 | G/A | — | uncertain significance |
| rs749781933 | 19:52,000,666 | C/T | — | uncertain significance |
| rs267605619 | 19:52,001,316 | G/A | — | uncertain significance |
| rs377633381 | 19:52,001,327 | G/T | — | uncertain significance |
| rs546280409 | 19:52,001,337 | C/T | — | uncertain significance |
| rs748172545 | 19:52,001,368 | G/A | — | uncertain significance |
| rs2513947226 | 19:52,001,397 | T/C | — | uncertain significance |
| rs753440374 | 19:52,001,413 | G/A | — | uncertain significance |
| rs1405875528 | 19:52,001,469 | A/G | — | uncertain significance |
| rs2513947433 | 19:52,001,472 | G/A | — | likely benign |
| rs760073371 | 19:52,001,506 | C/G | — | uncertain significance |
| rs139552591 | 19:52,001,516 | C/G | — | likely benign |
| rs199728425 | 19:52,001,522 | A/C | — | uncertain significance |
| rs4801871 | 19:52,002,317 | G/A | — | — |
| rs558174294 | 19:52,002,454 | T/G | — | uncertain significance |
| rs912348133 | 19:52,002,465 | G/A | — | uncertain significance |
| rs968491 | 19:52,002,488 | C/T | — | — |
| rs144437495 | 19:52,002,720 | C/T | — | uncertain significance |
| rs370144797 | 19:52,002,722 | T/C | — | uncertain significance |
| rs769103130 | 19:52,002,731 | C/T | — | uncertain significance |
| rs2513949496 | 19:52,002,734 | C/T | — | uncertain significance |
| rs201888334 | 19:52,002,839 | C/T | — | uncertain significance |
| rs143060530 | 19:52,002,846 | C/T | — | benign |
| rs569989918 | 19:52,002,862 | G/A | — | uncertain significance |
| rs1486078509 | 19:52,002,901 | C/A | — | uncertain significance |
| rs200045982 | 19:52,002,909 | G/C | — | uncertain significance |
| rs369376233 | 19:52,003,215 | T/C | — | uncertain significance |
| rs2513950985 | 19:52,003,230 | T/C | — | uncertain significance |
| rs765838298 | 19:52,003,261 | C/A | — | uncertain significance |
| rs749007078 | 19:52,003,300 | T/A | — | uncertain significance |
| rs752700082 | 19:52,003,348 | C/A | — | uncertain significance |
| rs1990354816 | 19:52,003,380 | A/C | — | uncertain significance |
| rs746468203 | 19:52,003,396 | C/T | — | uncertain significance |
| rs540287134 | 19:52,003,468 | T/A | — | uncertain significance |
| rs3826667 | 19:52,004,074 | C/T | downstream gene variant | — |
| rs2513953992 | 19:52,004,723 | T/A | — | uncertain significance |
| rs766022176 | 19:52,004,786 | C/T | — | uncertain significance |
| rs201439034 | 19:52,004,794 | C/T | — | uncertain significance |
| rs76945124 | 19:52,004,838 | T/C | — | benign |
| rs772884464 | 19:52,004,845 | T/C | — | uncertain significance |
| rs368298593 | 19:52,004,846 | A/G | — | uncertain significance |
| rs143800743 | 19:52,004,854 | G/T | — | uncertain significance |
| rs761260283 | 19:52,004,866 | G/A | — | uncertain significance |
| rs16982743 | 19:52,004,903 | G/A | stop gained | — |
| rs546182902 | 19:52,004,908 | G/T | — | uncertain significance |
| rs1990402191 | 19:52,004,921 | C/A | — | uncertain significance |
| rs565504103 | 19:52,004,933 | T/C | — | uncertain significance |
Gene information from NCBI Gene. Variant classifications from ClinVar.