SPOCK2
SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2
Summary
This gene encodes a protein which binds with glycosaminoglycans to form part of the extracellular matrix. The protein contains thyroglobulin type-1, follistatin-like, and calcium-binding domains, and has glycosaminoglycan attachment sites in the acidic C-terminal region. Three alternatively spliced transcript variants that encode different protein isoforms have been described for this gene. [provided by RefSeq, Oct 2011]
Known Variants42 total
| rsid | Position (GRCh37) | Alleles | Class | ClinVar |
|---|---|---|---|---|
| rs542440927 | 10:73,819,746 | C/T | — | — |
| rs1374304019 | 10:73,822,528 | T/C | — | uncertain significance |
| rs369530712 | 10:73,822,535 | C/T | — | uncertain significance |
| rs766818348 | 10:73,822,569 | C/G | — | uncertain significance |
| rs1840512607 | 10:73,822,609 | T/C | — | uncertain significance |
| rs115217058 | 10:73,822,644 | C/T | — | benign |
| rs199837517 | 10:73,822,645 | G/A | — | uncertain significance |
| rs200859576 | 10:73,822,655 | C/T | — | uncertain significance |
| rs58176786 | 10:73,822,789 | C/T | — | uncertain significance |
| rs564644987 | 10:73,822,803 | G/A | — | uncertain significance |
| rs531842927 | 10:73,822,809 | G/A | — | uncertain significance |
| rs2306322 | 10:73,822,855 | C/T | — | benign |
| rs370650762 | 10:73,822,860 | C/T | — | uncertain significance |
| rs775714079 | 10:73,822,900 | C/T | — | uncertain significance |
| rs780267799 | 10:73,823,951 | C/A | — | uncertain significance |
| rs762456283 | 10:73,823,972 | G/A | — | uncertain significance |
| rs563083994 | 10:73,826,774 | C/T | — | uncertain significance |
| rs7079142 | 10:73,826,775 | G/A | — | benign |
| rs147545341 | 10:73,826,776 | G/A | — | uncertain significance |
| rs771669238 | 10:73,826,821 | T/C | — | uncertain significance |
| rs199595453 | 10:73,826,849 | T/C | — | uncertain significance |
| rs767551463 | 10:73,826,858 | C/A | — | uncertain significance |
| rs148641213 | 10:73,827,379 | G/A | — | uncertain significance |
| rs1840588103 | 10:73,827,386 | C/T | — | uncertain significance |
| rs747720767 | 10:73,827,404 | C/G | — | uncertain significance |
| rs760125050 | 10:73,827,480 | G/A | — | likely benign |
| rs778035043 | 10:73,827,979 | C/A | — | uncertain significance |
| rs566447401 | 10:73,828,016 | G/A | — | uncertain significance |
| rs2492065753 | 10:73,828,041 | C/T | — | uncertain significance |
| rs2492070914 | 10:73,830,101 | C/G | — | uncertain significance |
| rs751454603 | 10:73,830,123 | T/C | — | uncertain significance |
| rs1840629663 | 10:73,830,143 | G/T | — | uncertain significance |
| rs41307524 | 10:73,831,956 | A/G | — | uncertain significance |
| rs186824562 | 10:73,831,971 | C/A | — | uncertain significance |
| rs1779884814 | 10:73,832,299 | T/C | — | uncertain significance |
| rs1668153 | 10:73,844,563 | A/C | — | — |
| rs1245547 | 10:73,846,341 | A/G | regulatory region variant | — |
| rs200198472 | 10:73,848,016 | C/T | — | uncertain significance |
| rs372206624 | 10:73,848,020 | C/T | — | uncertain significance |
| rs139928182 | 10:73,848,038 | C/T | — | likely benign |
| rs150218613 | 10:73,848,052 | G/A | — | benign |
| rs1245541 | 10:73,849,639 | G/A | regulatory region variant | — |
Gene information from NCBI Gene. Variant classifications from ClinVar.