rs1049353

This is a synonymous variant in the CNR1 gene — it does not change the protein's amino acid sequence.

Research that mentions this SNP (12)

Genetic variation in the endocannabinoid system and response to Cognitive Behavior Therapy for child anxiety disorders
AssociationN=1,309Kathryn J. Lester et al.(2017)· American Journal of Medical Genetics Part B: Neuropsychiatric Genetics

This study investigated genetic variation in the endocannabinoid system (CNR1, CNR2, FAAH genes) as a predictor of response to cognitive behavior therapy for childhood anxiety disorders in 1,309 children aged 5-17 years. Six SNPs showed nominal associations (P<0.05) with treatment response during follow-up: rs806365 (CNR1, P=0.004), rs2501431 (CNR2), rs2070956 (CNR2), rs7769940 (CNR1), rs2209172 (FAAH) associated with poorer response, and rs6928813 (CNR1) with better response. Only rs806365 survived multiple testing corrections in the fear-based anxiety disorder subset (P=0.0011). The authors conclude there is very limited evidence for genetic variation in endocannabinoid system genes predicting CBT treatment response.

Traits studied:Anxiety disordersCBT treatment responseGeneralized anxiety disorderObsessive-compulsive disorderPanic disorderPost-traumatic stress disorderSeparation anxiety disorderSocial anxiety disorderSpecific phobia
Longitudinal predictors of cannabis use and dependence in offspring from families at ultra high risk for alcohol dependence and in control families
AssociationN=338Shirley Y. Hill et al.(2016)· American Journal of Medical Genetics Part B: Neuropsychiatric Genetics

A longitudinal prospective study of 338 young adult offspring from families at high and low risk for alcohol dependence examined predictors of cannabis use patterns and cannabis abuse/dependence from ages 8-30. A low P300 amplitude trajectory in childhood predicted cannabis abuse/dependence in males (P=0.01). A four-SNP ANKK1-DRD2 haplotype (rs4938012-rs4938015-rs1800497-rs6277, G-G-G-C) was significantly associated with cannabis use frequency patterns (P=0.0008). Among individuals with cannabis abuse/dependence, the CNR1 rs806368 A>G minor allele conferred a 5.4-fold increase in likelihood of frequent persistent use versus declining use (P=0.003, OR=5.4).

Traits studied:Cannabis abuseCannabis dependenceCannabis useSubstance use disorder
Risky alcohol consumption in young people is associated with the fatty acid amide hydrolase gene polymorphism C385A and affective rating of drug pictures
AssociationN=260Kora-Mareen Bühler et al.(2014)· Molecular Genetics and Genomics

This candidate gene association study examined 10 SNPs in addiction-related genes (CNR1, FAAH, DRD2, ANKK1, COMT, OPRM1) in university students and identified the FAAH C385A (rs324420) CC genotype as significantly associated with risky alcohol consumption (p=0.006, OR=2.38). The finding was replicated in an independent sample of 83 participants. Additionally, affective ratings of drug-related pictures were positively correlated with alcohol, tobacco, and cannabis consumption.

Traits studied:Affective rating of drug-related picturesAlcohol consumption (risky drinking)Cannabis consumptionTobacco consumption
Screening genetic variability at the CNR1 gene in both major depression etiology and clinical response to citalopram treatment
AssociationN=469Marina Mitjans et al.(2013)· Psychopharmacology

This case-control association study analyzed five CNR1 gene polymorphisms (rs806368, rs1049353, rs806371, rs806377, rs1535255) in 319 major depression patients and 150 healthy controls, plus a pharmacogenetic subsample of 155 depressed patients treated with citalopram. The rs806371 G carrier genotype showed higher frequency in MD with melancholia (p=0.018) and psychotic symptoms (p=0.007). For treatment response, rs806368 and rs806371 TT homozygotes had increased risk of no remission at 12 weeks (OR=2.64 and OR=2.8, respectively). A significant time-sex-genotype interaction was found for rs806368, with C carrier men showing better antidepressant response throughout follow-up (p=0.026).

Traits studied:Antidepressant treatment responseClinical response to citalopramMajor depressionMelancholiaPsychotic symptomsRemission to citalopram
Cannabinoid Receptor Genotype Moderation of the Effects of Childhood Physical Abuse on Anhedonia and Depression
AssociationN=2,975Arpana Agrawal et al.(2012)· Archives of General Psychiatry

This genetic association study examined whether rs1049353 (CNR1 endocannabinoid receptor gene) moderates the effect of childhood physical abuse on anhedonia and depression. In the primary sample of 1,041 young adult women, carriers of the minor A allele showed attenuation of the abuse-anhedonia relationship (57% of GG individuals with abuse reported anhedonia vs. only 29% of AA/AG carriers; interaction OR=0.31, p=0.014). These findings were replicated in an independent sample of 1,934 Australian heroin-dependent individuals and controls (interaction OR=0.79, p=0.02). The protective effect of the rs1049353 A allele on major depressive disorder was largely attributable to its effect on anhedonic depression.

Traits studied:AnhedoniaAnhedonic DepressionChildhood Physical AbuseMajor Depressive Disorder
P‐selectin genotype is associated with the development of cancer cachexia
AssociationN=876Tan BH et al.(2012)· EMBO Molecular Medicine

Genetic association study of cancer cachexia identified 129 SNPs in 80 candidate genes in 775 cancer patients. The C allele of rs6136 in the SELP gene (encoding P-selectin) was significantly associated with reduced risk of cancer cachexia (weight loss >10%) in both the main study (OR 0.52; p=0.026) and validation cohort (OR 0.09; p=0.035). Multiple other genes including APEH, GHRL, TNFRSF1A, and CNR1 showed significant associations with cachexia-related traits.

Traits studied:Cancer cachexiaSerum P-selectin levelsWeight loss >10%Weight loss >15%Weight loss >5%Weight loss with systemic inflammation
Cannabinoid type 1 receptor gene polymorphisms are not associated with olanzapine-induced weight gain
AssociationN=78Young-Min Park et al.(2011)· Human Psychopharmacology: Clinical and Experimental

A candidate gene association study of 78 Korean schizophrenia patients found no significant association between three CNR1 polymorphisms (rs1049353, rs806368, rs4707436) and olanzapine-induced weight gain (all p>0.05). Genotype, allele, and haplotype frequencies did not differ between patients with ≥7% and <7% weight gain.

Traits studied:Olanzapine-induced weight gainSchizophrenia
Promoter variants of the cannabinoid receptor 1 gene (CNR1) in interaction with 5‐HTTLPR affect the anxious phenotype
AssociationN=154Judit Lazary et al.(2009)· American Journal of Medical Genetics Part B: Neuropsychiatric Genetics

This longitudinal study of 154 traumatized injury survivors examined associations between circulating endocannabinoids and CNR1/FAAH/MGLL genetic variants with depression severity at 6 months post-injury. Higher post-injury serum 2-arachidonylglycerol (2-AG) concentrations predicted greater depression severity at 6 months (β = 0.23, p = 0.007), and carriers of the minor allele (G) at CNR1 rs806371 experienced significantly greater depression (β = 0.19, p = 0.024), supporting a role for endocannabinoid system dysfunction in post-trauma depression risk.

Traits studied:DepressionMajor depressive disorder
Evidence for association between polymorphisms in the cannabinoid receptor 1 (CNR1) gene and cannabis dependence
AssociationN=1,923Arpana Agrawal et al.(2009)· American Journal of Medical Genetics Part B: Neuropsychiatric Genetics

This association study examined polymorphisms in the cannabinoid receptor 1 (CNR1) gene and cannabis dependence in 1,923 individuals from the COGA family study. Two SNPs showed significant association with DSM-III-R cannabis dependence: rs806380 (p=0.009) and rs806368 (p=0.05), with rs806380 driving the haplotype association. Results support a role for CNR1 variation in cannabis dependence risk.

Traits studied:Alcohol dependenceCannabis dependenceCannabis use disordersSubstance use disorders
Cannabinoid Receptor 1 Gene Association With Nicotine Dependence
AssociationN=1,649Xiangning Chen et al.(2008)· Archives of General Psychiatry

This candidate gene association study tested the hypothesis that the cannabinoid receptor 1 (CNR1) gene is associated with nicotine dependence across two independent samples from the Mid-Atlantic Twin Registry. In the VAND sample (n=688), haplotype 1-1-2 of markers rs2023239-rs12720071-rs806368 showed female-specific association with nicotine dependence and smoking initiation (P<.001 for SI, P=.02 for ND). Replication in the VAANX sample (n=961) confirmed female-specific haplotype associations with FTND score (P=.009 for haplotype 1-1-2 of combination 7-9-10). The findings suggest sex-specific genetic effects of CNR1 variants on nicotine dependence risk.

Traits studied:Fagerström Test for Nicotine Dependence (FTND)Nicotine dependenceSmoking initiation
Association of the cannabinoid receptor gene (CNR1) with ADHD and post‐traumatic stress disorder
AssociationN=920Ake T. Lu et al.(2008)· American Journal of Medical Genetics Part B: Neuropsychiatric Genetics

Association study of the cannabinoid receptor gene (CNR1) in two independent samples found a haplotype (C-G2) significantly associated with ADHD in Finnish adolescents (P = 0.008), with a threefold increased risk in males. A single SNP (rs1049353, allele A, P = 0.011) and alternative haplotype (C-A1, P = 0.04) were associated with post-traumatic stress disorder in LA Caucasian parents, suggesting CNR1 may be a risk factor for ADHD and possibly PTSD.

Traits studied:Anxiety disordersAttention deficit hyperactivity disorderDisruptive behavior disordersMood disordersPost-traumatic stress disorder
Cannabis receptor haplotype associated with fewer cannabis dependence symptoms in adolescents
AssociationN=541Christian J. Hopfer et al.(2006)· American Journal of Medical Genetics Part B: Neuropsychiatric Genetics

This association study examined four SNPs in the CNR1 gene (encoding the cannabinoid receptor) in 541 adolescents (327 cases with cannabis dependence symptoms, 214 controls without symptoms). SNP rs806380 (A/G, located in intron 2) showed significant association with protection from cannabis dependence symptoms (p=0.034, protective effect for G allele). A common haplotype (GGCC, present in 21% of subjects) was significantly associated with fewer cannabis dependence symptoms in the overall sample (LRT=16.47, p=0.021), though effects were attenuated in stratified ethnic analyses.

Traits studied:Cannabis abuse and dependenceCannabis dependence symptomsProblem cannabis use

About CNR1

This gene encodes one of two cannabinoid receptors. The cannabinoids, principally delta-9-tetrahydrocannabinol and synthetic analogs, are psychoactive ingredients of marijuana. The cannabinoid receptors are members of the guanine-nucleotide-binding protein (G-protein) coupled receptor family, which inhibit adenylate cyclase activity in a dose-dependent, stereoselective and pertussis toxin-sensitive manner. The two receptors have been found to be involved in the cannabinoid-induced CNS effects (including alterations in mood and cognition) experienced by users of marijuana. Multiple transcript variants encoding two different protein isoforms have been described for this gene. [provided by RefSeq, May 2009]

View all CNR1 variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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