rs1057898
This is a 3 prime utr variant variant in the SMAD5 gene.
▶Research that mentions this SNP (2)
▶Genetic variants in noncoding PIWI‐interacting RNA and colorectal cancer riskAssociationN=280Haiyan Chu et al.(2015)· Cancer
This PhD thesis investigated pharmacogenetics of microRNAs and immune system genes in locally advanced rectal cancer (LARC) patients treated with neoadjuvant chemoradiotherapy. In 265 LARC patients, five SNPs were identified as predictive biomarkers of pathological response: DROSHA-rs10719 (OR=1.87, p=0.0274) and SMAD3-rs17228212 (OR=2.01, p=0.0049) were unfavorable, while SMAD3-rs744910 (OR=0.45, p=0.0153), SMAD3-rs745103 (OR=0.48, p=0.0471), and TRBP-rs6088619 (OR=0.39, p=0.0125) were protective. In 235 LARC patients, three prognostic biomarkers for 2-year disease-free survival were identified: IL17F-rs641701 (HR=3.23, p=0.003), IL17F-rs9463772 (HR=2.89, p=0.002), and STAT3-rs8069645 (HR=0.50, p=0.044).
▶Genetic Polymorphism of SMAD5 is Associated With Kawasaki DiseaseAssociationN=408Ja Hyang Cho et al.(2014)· Pediatric Cardiology
This case-control genetic association study investigated 15 SNPs of the SMAD5 gene in 105 Korean Kawasaki disease patients and 303 healthy controls. SNP rs3206634 was significantly associated with Kawasaki disease susceptibility in a recessive model with odds ratio = 2.31 (95% CI 1.12-4.76, p = 0.019), where the minor C allele increased disease risk. However, none of the 15 SMAD5 SNPs were associated with the development of coronary artery lesions in Kawasaki disease patients.
About SMAD5
The protein encoded by this gene is involved in the transforming growth factor beta signaling pathway that results in an inhibition of the proliferation of hematopoietic progenitor cells. The encoded protein is activated by bone morphogenetic proteins type 1 receptor kinase, and may be involved in cancer. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2014]
View all SMAD5 variants →Gene information from NCBI Gene. Variant classifications from ClinVar.
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