rs10759932

This variant is located in the TLR4 gene.

Research that mentions this SNP (5)

Association of TLR4 gene non-missense single nucleotide polymorphisms with rheumatoid arthritis in Chinese Han population
AssociationN=460Hongju Yang et al.(2013)· Rheumatology International

This case-control association study examined four TLR4 non-missense SNPs in 213 Chinese Han RA patients versus 247 controls. The 3' UTR SNP rs41426344 showed significant association with rheumatoid arthritis (C allele: OR=5.22, P=0.001; CC genotype: OR=3.94, P=0.009), as did rs7873784 (C allele: OR=1.54, P=0.028). Haplotype analysis identified H11 (CCGG) as protective and H5/H13 as risk haplotypes. The study demonstrates ethnic-specific allele frequency variation and suggests regulatory region polymorphisms play a role in RA susceptibility.

Traits studied:Rheumatoid arthritis
Genetic variation in innate immunity and inflammation pathways associated with lung cancer risk
AssociationN=828Meredith S. Shiels et al.(2012)· Cancer

This case-control study evaluated 1,429 SNPs in innate immunity and inflammation genes in 378 lung cancer cases and 450 controls from the PLCO Cancer Screening Trial. The main finding was a significant association between rs4648127 (NFKB1) and reduced lung cancer risk (OR=0.56, 95% CI 0.37-0.86 in PLCO; OR=0.79, 95% CI 0.69-0.90 in replication GWAS), implicating inflammation in lung cancer etiology.

Traits studied:AdenocarcinomaLarge cell carcinomaLung cancerSmall cell carcinomaSquamous cell carcinoma
Toll‐like receptor genes and their association with colon and rectal cancer development and prognosis
AssociationN=6,174Martha L. Slattery et al.(2012)· International Journal of Cancer

Population-based case-control study examining genetic variation in toll-like receptor genes (TLR2, TLR3, TLR4) and colon/rectal cancer risk and survival. TLR3 rs11721827 was associated with rectal cancer (OR 1.27, 95% CI 1.02-1.58), while TLR3 rs3775292 and TLR4 rs11536898 were associated with colon cancer (OR 0.68 and 0.50, respectively). Significant interactions were observed with NSAID use, smoking, and dietary factors. TLR2 rs5743704 and rs5743708 were associated with worse colon cancer survival (HRR 1.89 and 1.74, respectively).

Traits studied:Colon cancerRectal cancer
Sequence variants of toll-like receptor 4 (TLR4) and the risk of prostate cancer in Korean men
AssociationN=463Hae Jong Kim et al.(2012)· World Journal of Urology

A case-control study of 463 Korean men (240 prostate cancer patients, 223 controls) examined 11 TLR4 gene polymorphisms for association with prostate cancer risk. The study found rs11536889 (a 3' UTR variant) was significantly associated with increased prostate cancer risk (OR=1.81, P=0.005), and the haplotype ht2 also showed significant association (OR=1.77, P=0.009). These findings suggest TLR4 polymorphisms may alter susceptibility to prostate cancer.

Traits studied:Prostate cancer
The role of polymorphisms in Toll-like receptors and their associated intracellular signaling genes in measles vaccine immunity
AssociationN=764Ovsyannikova IG et al.(2011)· Human Genetics

This study examined associations between polymorphisms in 454 Toll-like receptor (TLR) and related signaling gene SNPs and measles vaccine-specific immune responses in 764 subjects. The major allele of TLR2 rs3804100 was associated with increased antibody response (660 vs. 892 mIU/ml, p=0.002), while TLR4 rs5030710 showed decreased response (2,209 vs. 830 mIU/ml, p=0.001). A MAP3K7 haplotype was associated with lower antibody levels (p=0.01), and TLR-related SNPs including rs3748022 (IKBKE Pro713Leu), rs1786704 (TIRAP), rs702966 (KIAA1542/IRF7), and others were associated with variations in measles-specific cytokine responses (IL-2, IL-6, IL-10, IFNα, IFNγ, IFNλ-1, TNFα).

Traits studied:IFNγ Elispot responseMeasles vaccine immunityMeasles-specific IFNα secretionMeasles-specific IFNγ secretionMeasles-specific IFNλ-1 secretionMeasles-specific IL-10 secretionMeasles-specific IL-2 secretionMeasles-specific IL-6 secretionMeasles-specific TNFα secretionMeasles-specific antibody response

About TLR4

The protein encoded by this gene is a member of the Toll-like receptor (TLR) family which plays a fundamental role in pathogen recognition and activation of innate immunity. TLRs are highly conserved from Drosophila to humans and share structural and functional similarities. They recognize pathogen-associated molecular patterns that are expressed on infectious agents, and mediate the production of cytokines necessary for the development of effective immunity. The various TLRs exhibit different patterns of expression. In silico studies have found a particularly strong binding of surface TLR4 with the spike protein of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the causative agent of Coronavirus disease-2019 (COVID-19). This receptor has also been implicated in signal transduction events induced by lipopolysaccharide (LPS) found in most gram-negative bacteria. Mutations in this gene have been associated with differences in LPS responsiveness, and with susceptibility to age-related macular degeneration. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Aug 2020]

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Gene information from NCBI Gene. Variant classifications from ClinVar.

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