rs16945088

This is a intron variant variant in the FTO gene.

GWAS Catalog Trait Associations (1)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

Research that mentions this SNP (2)

Influences of FTO gene on onset age of adult overweight
AssociationN=658Hao Mei et al.(2012)· Human Genetics

This longitudinal study examined 658 white participants from the Bogalusa Heart Study to investigate FTO gene effects on the onset age of overweight in adults. Using survival analysis on 30 FTO tag SNPs, rs9939609 showed the strongest association with overweight onset age (p=0.004), with genotype AA associated with significantly earlier onset (mean 22.82 years at 50% prevalence) compared to AT (28.96 years) and TT (27.76 years), with odds ratios of 0.52 (AA vs AT) and 0.58 (AA vs TT) for survival beyond age 18.

Traits studied:Age of Onset of OverweightBody Mass Index (BMI)ObesityOverweight
FTO influences on longitudinal BMI over childhood and adulthood and modulation on relationship between birth weight and longitudinal BMI
AssociationN=658Hao Mei et al.(2010)· Human Genetics

This longitudinal study examined FTO gene SNPs in 658 white subjects from childhood to adulthood. While FTO SNPs showed no significant association with birth weight or longitudinal BMI during childhood, three SNPs (rs9939609, rs17820875, and rs860713) were significantly associated with longitudinal BMI in adulthood (P = 5.3×10⁻⁵, 2.0×10⁻⁴, and 0.001, respectively). The study also identified interactions between birth weight and FTO variants, showing that lower birth weight predisposes to higher adult BMI depending on FTO risk genotypes.

Traits studied:Birth weightBody mass index (BMI)Longitudinal BMI changeObesity

About FTO

This gene is a nuclear protein of the AlkB related non-haem iron and 2-oxoglutarate-dependent oxygenase superfamily but the exact physiological function of this gene is not known. Other non-heme iron enzymes function to reverse alkylated DNA and RNA damage by oxidative demethylation. Studies in mice and humans indicate a role in nervous and cardiovascular systems and a strong association with body mass index, obesity risk, and type 2 diabetes. [provided by RefSeq, Jul 2011]

View all FTO variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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