rs1801968

This is a variant in the TOR1A gene that changes a aspartate to an histidine.

GWAS Catalog Trait Associations (2)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

smoking initiation

Saunders GRB et al. Genetic diversity fuels gene discovery for tobacco and alcohol use. Nature 612(7941):720-724 (2022)
Allele G
OR 0.01
p 2.0e-12
N 3,382,012
Large GWAS
European, East Asian, Hispanic or Latin American, African unspecified

body height

Allele G
OR 0.01
p 3.0e-12
N 5,314,291
Large GWAS
European, Hispanic or Latin American, East Asian, African unspecified, South Asian

ClinVar annotation

Risk Factor★★★
14 submitters13 publications

Arthrogryposis multiplex congenita 5; Dystonic disorder; Early-onset generalized limb-onset dystonia; not specified

View on ClinVar →

Research that mentions this SNP (3)

Is TOR1A a risk factor in adult‐onset primary torsion dystonia?
ReviewJustus L. Groen et al.(2013)· Movement Disorders

This comprehensive literature review examines the role of single-nucleotide polymorphisms (SNPs) and genetic variants in dystonia susceptibility, reviewing 43 published studies (2001-2017) across 29 genes. Key findings include associations of TOR1A variants (rs1182, rs1801968, rs35153737) with focal dystonia, BDNF rs6265 (Val66Met) with cervical dystonia and blepharospasm, and preliminary GWAS-identified variants in ARSG (rs11655081, rs61999318) and NALCN with dystonia risk. The review concludes that genetic factors confer dystonia susceptibility through multiple pathways, though many associations require validation in larger cohorts.

Traits studied:BlepharospasmCervical dystoniaCranial dystoniaDystoniaFocal dystoniaGeneralized dystoniaMusician's dystoniaPrimary dystoniaPrimary torsion dystoniaSegmental dystoniaSpasmodic dysphoniaWriter's cramp
Genetic evidence for an association of the TOR1A locus with segmental/focal dystonia
AssociationN=263Nutan Sharma et al.(2010)· Movement Disorders

This association study of 263 North American patients with focal or segmental dystonia found a strong protective association between the deletion allele at the Mtdel SNP (rs3842225) in the TOR1A gene and reduced risk of dystonia (OR=0.59, p=0.007), particularly for cervical dystonia (OR=0.48, p=0.002). The D216H SNP (rs1801968) showed no significant association. The findings suggest genetic variability in the TOR1A locus contributes to focal dystonia risk, though results vary by population.

Traits studied:BlepharospasmBrachial dystoniaCervical dystoniaCranial dystoniaFocal dystoniaLaryngeal dystoniaSegmental dystonia
The p.Asp216His TOR1A allele effect is not found in the French population
AssociationN=348Mélissa Yana Frédéric et al.(2009)· Movement Disorders

This study attempted to replicate findings by Risch et al. showing that the rs1801968 H allele (p.Asp216His) in TOR1A has a protective effect on DYT1 dystonia penetrance in European populations. The French study of 53 index cases found that all TOR1A c.907delGAG mutation carriers had the D allele in cis, but failed to replicate the protective trans effect of the H allele observed in American families, suggesting population-specific genetic modifiers.

Traits studied:DYT1 dystoniaEarly-onset torsion dystonia

About TOR1A

The protein encoded by this gene is a member of the AAA family of adenosine triphosphatases (ATPases), is related to the Clp protease/heat shock family and is expressed prominently in the substantia nigra pars compacta. Mutations in this gene result in the autosomal dominant disorder, torsion dystonia 1. [provided by RefSeq, Jul 2008]

View all TOR1A variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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