rs2070600
This is a variant in the AGER gene that changes a glycine to an serine.
▶GWAS Catalog Trait Associations (15)
Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.
GWAS Catalog Trait Associations (15)
Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.
FEV/FVC ratio
pulmonary surfactant-associated protein d measurement
advanced glycosylation end product-specific receptor amount
peak expiratory flow
blood protein amount
chronic obstructive pulmonary disease
sRAGE measurement
FEV/FVC ratio, pulmonary function measurement
vital capacity
advanced glycation end-product measurement
▶ClinVar annotation
▶Research that mentions this SNP (3)
▶Soluble receptor for AGE in diabetic nephropathy and its progression in Finnish individuals with type 1 diabetesAssociationN=3,647Jenny M. Wadén et al.(2019)· Diabetologia
This study in 3,647 Finnish type 1 diabetes patients found that soluble receptor for AGE (sRAGE) concentrations are associated with diabetic nephropathy and progression from macroalbuminuria to ESRD, but do not provide additional predictive value beyond conventional factors like eGFR. Mendelian randomization analysis using SNP rs2070600 (G82S) found no evidence that sRAGE causally contributes to ESRD progression, suggesting sRAGE is a biomarker rather than a causal factor in diabetic kidney disease.
▶Genetic variants in five novel loci including CFB and CD40 predispose to chronic hepatitis BAssociationN=6,033Jiang DK et al.(2015)· Hepatology
A genome-wide association study of 83 plasma proteins relevant to cardiovascular disease in 3,394 European subjects identified 79 genome-wide significant loci (p<5e-8), with 55 replicating in independent cohorts (n=2,639). Using eQTL analysis and network methods, the authors proposed plausible causal mechanisms for 25 trans-acting loci including post-translational regulation of KITLG by MMP9 and several receptor-ligand pairs. Multiple loci showed evidence of causal association with coronary artery disease risk.
▶Receptor for advanced glycation end-products (RAGE) provides a link between genetic susceptibility and environmental factors in type 1 diabetesAssociationN=3,624Forbes JM et al.(2011)· Diabetologia
This study examined genetic susceptibility conferred by AGER gene polymorphisms in type 1 diabetes using 3,624 Finnish individuals. Three SNPs (rs2070600 OR=1.452, rs17493811 OR=1.518, rs9469089 OR=0.423) were associated with type 1 diabetes on a high-risk HLA background. Declining circulating soluble RAGE levels at autoantibody seroconversion predicted disease progression in children, and AGE-lowering therapy (alagebrium chloride) reduced autoimmune diabetes incidence by 80% in NOD mice while restoring RAGE levels.
About AGER
The advanced glycosylation end product (AGE) receptor encoded by this gene is a member of the immunoglobulin superfamily of cell surface receptors. It is a multiligand receptor, and besides AGE, interacts with other molecules implicated in homeostasis, development, and inflammation, and certain diseases, such as diabetes and Alzheimer's disease. Many alternatively spliced transcript variants encoding different isoforms, as well as non-protein-coding variants, have been described for this gene (PMID:18089847). [provided by RefSeq, May 2011]
View all AGER variants →Gene information from NCBI Gene. Variant classifications from ClinVar.
Community Wiki
No community notes yet for this variant. Sign in to start one.
Comments
Sign in to join the discussion.
Loading comments…