rs2236337

This is a regulatory region variant variant in the GZMB gene.

Research that mentions this SNP (2)

A genetic variant in granzyme B is associated with progression of joint destruction in rheumatoid arthritis
AssociationN=1,418Knevel R. et al.(2013)· Arthritis & Rheumatism

This association study of 1,418 RA patients across 4 European cohorts identified rs8192916 (located in GZMB) as significantly associated with the rate of joint destruction in rheumatoid arthritis (relative rate 1.05 per year, P = 7.8 × 10⁻⁴). Expression QTL analysis demonstrated that the minor allele of rs8192916 was correlated with higher GZMB expression in whole blood (P = 2.27 × 10⁻⁵).

Traits studied:Joint destruction progressionRadiographic joint damageRheumatoid arthritis
Genetic loci contributing to hemophagocytic lymphohistiocytosis do not confer susceptibility to systemic‐onset juvenile idiopathic arthritis
AssociationN=3,517Rachelle Donn et al.(2008)· Arthritis & Rheumatism

This case-control association study investigated whether SNPs in genes involved in hemophagocytic lymphohistiocytosis (PRF1, GZMB, UNC13D, Rab27a) confer susceptibility to systemic-onset juvenile idiopathic arthritis. Testing 27 SNPs across these 4 genes in 133 UK Caucasian patients and 384 controls (expanded with ~3,000 additional WTCCC controls), the study found no significant associations between any SNP and systemic-onset JIA, either by single-point or haplotype analysis, concluding these genes do not contribute substantial risk to the disease.

Traits studied:Hemophagocytic lymphohistiocytosisMacrophage activation syndromeSystemic-onset juvenile idiopathic arthritis

About GZMB

This gene encodes a member of the granzyme subfamily of proteins, part of the peptidase S1 family of serine proteases. The encoded preproprotein is secreted by natural killer (NK) cells and cytotoxic T lymphocytes (CTLs) and proteolytically processed to generate the active protease, which induces target cell apoptosis. This protein also processes cytokines and degrades extracellular matrix proteins, and these roles are implicated in chronic inflammation and wound healing. Expression of this gene may be elevated in human patients with cardiac fibrosis. [provided by RefSeq, Sep 2016]

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Gene information from NCBI Gene. Variant classifications from ClinVar.

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