rs2281135
This is a intron variant variant in the PNPLA3 gene.
▶GWAS Catalog Trait Associations (4)
Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.
GWAS Catalog Trait Associations (4)
Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.
serum alanine aminotransferase amount, enzyme/coenzyme activity trait
diacylglycerol 38:5 measurement
diacylglycerol 38:3 measurement
triglyceride measurement
▶Research that mentions this SNP (2)
▶The Association of Genetic Variability in Patatin-Like Phospholipase Domain-Containing Protein 3 (PNPLA3) with Histological Severity of Nonalcoholic Fatty Liver Disease†AssociationN=1,117Yaron Rotman et al.(2010)· Hepatology
In a cohort of 894 adults with histologically-confirmed NAFLD, the rs738409 minor allele in PNPLA3 (I148M) was associated with increased steatosis (p=0.03, OR 1.46), portal inflammation (p=2.5×10⁻⁴, OR 1.57), lobular inflammation (p=0.005, OR 1.84), Mallory-Denk bodies (p=0.015, OR 1.55), and fibrosis (p=7.7×10⁻⁶, OR 1.50 per G allele). Three SNPs on chromosome 10 (rs11591741, rs11597086, rs11597390) in the CPN1-ERLIN1-CHUK region were independently associated with fibrosis severity (p=0.010). In pediatric patients, rs738409 G allele was associated with younger age at biopsy (p=0.045).
▶PNPLA3 Variants Specifically Confer Increased Risk for Histologic Nonalcoholic Fatty Liver Disease But Not Metabolic Disease†,‡AssociationN=2,083Elizabeth K. Speliotes et al.(2010)· Hepatology
A case-control study examining genetic variants associated with liver function tests and steatosis and their relationship to histologically-defined nonalcoholic fatty liver disease (NAFLD). The rs738409 PNPLA3 variant showed the strongest association with NAFLD (OR = 3.26, 95% CI 2.11-7.21, p = 3.60E-43), and displayed significant associations with severe histologic features including fibrosis, ballooning, and inflammation within the NAFLD cohort. Other genetic variants at CPN1, ABO, GPLD1, JMJD1C, GGT1, and HNF1A loci did not show significant associations with NAFLD, suggesting PNPLA3 genetic variation specifically confers increased risk for histologic NAFLD without strong effects on metabolic traits.
About PNPLA3
The protein encoded by this gene is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes. The encoded protein, which appears to be membrane bound, may be involved in the balance of energy usage/storage in adipocytes. [provided by RefSeq, Jul 2008]
View all PNPLA3 variants →Gene information from NCBI Gene. Variant classifications from ClinVar.
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