rs2297518

This is a variant in the NOS2 gene that changes a serine to an leucine.

GWAS Catalog Trait Associations (1)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

level of nitric oxide synthase, inducible in blood

Allele A
OR 0.09
p 2.0e-25
N 47,745
Large GWAS
European

ClinVar annotation

Benign☆☆☆
2 submitters1 publication

NOS2-related disorder; not specified

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Research that mentions this SNP (5)

Genetic polymorphisms in oxidative stress‐related genes are associated with outcomes following treatment for aggressive B‐cell non‐Hodgkin lymphoma
AssociationN=909Heather L. Gustafson et al.(2014)· American Journal of Hematology

Genetic polymorphisms in oxidative stress-related genes were associated with treatment outcomes in aggressive B-cell non-Hodgkin lymphoma. In discovery (n=337) and validation (n=572) cohorts, rare homozygotes for MPO rs2243828 (HR=1.87, P=0.013) and AKR1C3 rs10508293 (HR=2.09, P=0.0032) were associated with increased risk of progression, while NCF4 rs1883112 rare homozygotes showed protective effects against progression (HR=0.66, P=0.06 discovery; HR=0.66, P=0.05 validation). Meta-analysis confirmed NCF4 association with improved survival outcomes (HR=0.66, P<0.01).

Traits studied:Aggressive B-cell non-Hodgkin lymphomaDiffuse large B-cell lymphoma (DLBCL)Hematologic toxicityOverall survivalProgression-free survival
A non-synonymous SNP in the NOS2 associated with septic shock in patients with sepsis in Chinese populations
AssociationN=579Zhifu Wang et al.(2013)· Human Genetics

A case-control association study in Chinese populations (579 septic patients) found that the NOS2 rs2297518 G>A non-synonymous polymorphism (S608L) in exon 16 was significantly associated with increased susceptibility to septic shock (OR=3.29, 95% CI=1.40-7.72, P=0.0047 in Liaoning; OR=3.49, 95% CI=1.57-7.79, P=0.0019 in Jiangsu). Functional assays showed the at-risk GA genotype had 1.38-fold higher NOS2 enzyme activity compared to GG genotype (P=0.32).

Traits studied:Multiple organ dysfunction syndrome (MODS)Septic shockSevere sepsis
NOS2A, TLR4, and IFNGR1 interactions influence pulmonary tuberculosis susceptibility in African-Americans
AssociationN=766Velez DR et al.(2009)· Human Genetics

A case-control association study in African-Americans (279 cases, 166 controls) and Caucasians (198 cases, 123 controls) examined 39 SNPs in the NOS2A gene for pulmonary tuberculosis susceptibility. Ten NOS2A SNPs were associated with TB in African-Americans, with the strongest associations at rs2274894 (OR=1.84, 95% CI 1.23-2.77, p=0.003) and rs7215373 (OR=1.67, 95% CI 1.17-2.37, p=0.004). Strong gene-gene interactions were observed between NOS2A SNPs and variants in IFNGR1 and TLR4 genes, suggesting synergistic effects on TB susceptibility.

Traits studied:Pulmonary TBTuberculosis
Influence of the inducible nitric oxide synthase gene (NOS2A) on inflammatory bowel disease susceptibility
AssociationN=1,227Martín MC et al.(2007)· Immunogenetics

This case-control association study examined 336 Crohn's disease patients, 355 ulcerative colitis patients, and 536 healthy controls from Spain to test whether polymorphisms in the NOS2A (inducible nitric oxide synthase) gene influence inflammatory bowel disease susceptibility. The (CCTTT)n microsatellite allele 13 was associated with increased UC risk (OR=1.64, p=0.001), promoter SNPs rs2779251 and rs2779248 were associated with UC predisposition, and the haplotype C(-)GCC carrying both exonic risk alleles increased CD susceptibility (OR=1.74, p=0.007), suggesting NOS2A involvement in IBD etiology.

Traits studied:Crohn's diseaseInflammatory bowel diseaseUlcerative colitis
NOS2A and the modulating effect of cigarette smoking in Parkinson's disease
AssociationN=2,245Dana B. Hancock et al.(2006)· Annals of Neurology

This family-based case-control study examined 50 SNPs across three nitric oxide synthase genes (NOS1, NOS2A, NOS3) in 1,065 Parkinson disease cases and 1,180 controls from 695 families. Significant associations with PD were found for 8 NOS1 SNPs (rs3782218, rs11068447, rs7295972, rs2293052, rs12829185, rs1047735, rs3741475, rs2682826; p=0.00083-0.046) and 7 NOS2A SNPs (rs2072324, rs944725, rs12944039, rs2248814, rs2297516, rs1060826, rs2255929; p=0.0000040-0.047) in early-onset sporadic PD families. Gene-environment interactions were detected between NOS1 SNPs (rs12829185, rs1047735, rs2682826) and pesticide exposure (p=0.012-0.034) and between NOS2A SNPs (rs2248814, rs1060826) and cigarette smoking (p=0.013-0.021).

Traits studied:Parkinson disease

About NOS2

Nitric oxide is a reactive free radical which acts as a biologic mediator in several processes, including neurotransmission and antimicrobial and antitumoral activities. This gene encodes a nitric oxide synthase which is expressed in liver and is inducible by a combination of lipopolysaccharide and certain cytokines. Three related pseudogenes are located within the Smith-Magenis syndrome region on chromosome 17. [provided by RefSeq, Jul 2008]

View all NOS2 variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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