rs2854744

This is a regulatory region variant variant in the IGFBP3 gene.

Research that mentions this SNP (11)

Associations of polymorphisms in the genes of FGFR2, FGF1, and RBFOX2 with breast cancer risk by estrogen/progesterone receptor status
AssociationN=2,416Yu‐Ling Cen et al.(2013)· Molecular Carcinogenesis

A hospital-based case-control study in rural and urban India (1,204 cases; 1,212 controls) examined genetic and lifestyle risk factors for breast cancer. Four SNPs in FGFR2 (rs1219648, rs2420946, rs2981575, rs2981582) showed positive associations with breast cancer (ORs 1.32-1.47). Additional SNPs in obesity and metabolic genes (rs374748 in FBN2, rs2922763 in HNF4G, rs2116830 in KCNMA1, rs11121832 in MTHFR, rs16886165 in MAP3K1, rs11594610 in TCF7L2, rs2274459 in MLN) were associated with increased breast cancer risk. Waist-to-hip ratio ≥0.95 showed strong association (OR 3.78; 95% CI 2.92-4.89), and women living first 20 years in rural areas showed protective effect (OR 0.77).

Traits studied:Breast cancerBreast cancer riskER+/PR+ breast cancerER/PR negative breast cancerTriple negative breast cancer
Genetic variations in regulator of G‐protein signaling (RGS) confer risk of bladder cancer
AssociationN=1,606Eugene K. Lee et al.(2013)· Cancer

Case-control study of 803 bladder cancer patients and 803 healthy controls examining 95 SNPs in 17 RGS (Regulator of G-Protein Signaling) pathway genes. Rs10759 in RGS4 showed the strongest association with reduced bladder cancer risk (OR 0.77, P<0.001), and cumulative analysis of 5 significant SNPs yielded OR 4.13 (95% CI 2.14-7.98) for high-risk genotype combinations. Eleven and thirteen SNPs were associated with recurrence and progression in non-muscle invasive bladder cancer (NMIBC); rs2344673 in RGS5 was most significant for death in muscle-invasive bladder cancer (MIBC), with median survival of 13.3 months vs 81.9 months.

Traits studied:Bladder cancer death/survivalBladder cancer progressionBladder cancer recurrenceBladder cancer riskMuscle-invasive bladder cancer (MIBC)Non-muscle invasive bladder cancer (NMIBC)
Genetic polymorphisms on 8q24.1 and 4p16.3 are not linked with urothelial carcinoma of the bladder in contrast to their association with aggressive upper urinary tract tumours
AssociationN=492David R. Yates et al.(2013)· World Journal of Urology

This case-control study of 231 bladder urothelial carcinoma (UC) patients and 261 benign controls found that rs9642880[T] and rs798766[T] variants increase bladder-UC risk (OR=1.72, p=0.028 and OR=1.84, p=0.01 respectively), but unlike upper tract UC, these variants are not associated with disease aggressiveness (grade or stage). The findings highlight distinct genetic differences between bladder-UC and upper urinary tract urothelial carcinoma.

Traits studied:Bladder urothelial carcinomaTumor aggressivenessTumor gradeTumor stageUpper urinary tract urothelial carcinoma
Insulin‐like growth factor pathway genes and blood concentrations, dietary protein and risk of prostate cancer in the NCI Breast and Prostate Cancer Cohort Consortium (BPC3)
AssociationN=10,216Tsilidis KK et al.(2013)· International Journal of Cancer

This nested case-control study (5,253 cases, 4,963 controls) examined 16 SNPs in IGF pathway genes and their associations with prostate cancer risk, testing gene-environment interactions with dietary protein intake. Although the 16 SNPs were significantly associated with circulating IGF-1 or IGFBP-3 levels as expected, none were significantly associated with prostate cancer risk, and the SNP-protein interactions did not substantially differ by protein intake after multiple testing correction.

Traits studied:IGF-1 concentrationsIGFBP-3 concentrationsProstate cancer
Urinary bladder cancer risk in relation to a single nucleotide polymorphism (rs2854744) in the insulin-like growth factor-binding protein-3 (IGFBP3) gene
AssociationN=3,175Selinski S. et al.(2012)· Archives of Toxicology

A case-control validation study of 1,450 cases and 1,725 controls from Germany, Hungary, Venezuela, and Pakistan investigated the association of rs2854744 in the IGFBP3 gene with urinary bladder cancer risk. The study found no significant association (P = 0.6510 adjusted for age, gender, and smoking; OR = 1.07, 95% CI 0.86-1.34), failing to confirm the previously published association by Safarinejad et al. A meta-analysis including all available case-control series resulted in an OR of 1.00 (P = 0.9562), indicating no effect of the [A] allele.

Traits studied:Urinary bladder cancer
Genes in the insulin and insulin-like growth factor pathway and odds of metachronous colorectal neoplasia
AssociationN=1,439Elizabeth C. LeRoy et al.(2011)· Human Genetics

This study analyzed 521 SNPs in 18 insulin and IGF pathway genes among 1,439 subjects from two chemoprevention trials to identify genetic interactions associated with metachronous colorectal neoplasia. Classification and regression tree (CART) analysis identified gene-by-gene interactions: carriers of the A allele at rs7166348 (IGF1R) with AA genotype at rs1823023 (PIK3R1) had the highest probability of adenoma (71.8%, OR 3.7; 95%CI 2.2-6.5), while those with A at rs7166348, G at rs1823023, and AA at rs10426094 (INSR) had the lowest risk (14.3%, OR 0.22; 95%CI 0.07-0.66). Multifactor dimensionality reduction identified a three-way interaction (rs7166348, rs12609995, rs2715425) with OR 2.12 (95%CI 1.70-2.65) for metachronous neoplasia.

Traits studied:Colorectal adenomaColorectal cancerMetachronous colorectal neoplasia
The association between bladder cancer and a single nucleotide polymorphism (rs2854744) in the insulin-like growth factor (IGF)-binding protein-3 (IGFBP-3) gene
AssociationN=486Mohammad Reza Safarinejad et al.(2011)· Archives of Toxicology

This Iranian case-control study examined the association between the IGFBP-3 A-202C polymorphism (rs2854744) and bladder cancer risk in 162 cancer patients and 324 controls. The study found that the AA genotype was protective against bladder cancer (OR=0.48, 95% CI 0.24-0.64, P=0.001) while the AC genotype increased risk (OR=1.76, 95% CI 1.27-2.84, P=0.038). The protective effect of the AA genotype was more pronounced in advanced bladder cancers, with no AA genotype carriers having high-grade tumors.

Traits studied:Bladder cancerTransitional cell carcinoma
IGF1, IGFBP1, and IGFBP3 genes and mammographic density: The Multiethnic Cohort
AssociationN=819Martijn Verheus et al.(2010)· International Journal of Cancer

This study investigated the association between common genetic variation in IGF1, IGFBP1, and IGFBP3 genes and mammographic density in 819 women from the Multiethnic Cohort. Only weak evidence was found for associations: rs35767 (IGF1, p=0.03) was associated with 3.2% lower mammographic density, rs35539615 (IGFBP1, p=0.05) with higher density, and rs2453839 (IGFBP3, p=0.01) with lower density. Ethnicity significantly modified the associations for IGFBP3 variants.

Traits studied:Mammographic density
Genetic variation and circulating levels of IGF‐I and IGFBP‐3 in relation to risk of proliferative benign breast disease
AssociationN=718Xuefen Su et al.(2010)· International Journal of Cancer

This case-control study examined genetic variants in IGF-I, IGFBP-1, and IGFBP-3 genes in relation to proliferative benign breast disease (BBD) in 359 cases and 359 controls from the Nurses' Health Study II. Higher circulating IGFBP-3 levels were significantly associated with increased BBD risk (OR 1.70, p-trend = 0.03), while minor alleles of IGFBP-3 SNPs rs3110697 and rs2132570 were associated with significantly lower BBD risk (OR 0.6 and 0.2, p-trend = 0.02). Three other IGFBP-3 SNPs (rs2854744, rs2960436, rs2854746) were strongly associated with circulating IGFBP-3 levels.

Traits studied:Breast cancer riskProliferative benign breast disease
Altered transmission of HOX and apoptotic SNPs identify a potential common pathway for clubfoot
AssociationN=1,927Audrey R. Ester et al.(2009)· American Journal of Medical Genetics Part A

Family-based association study identifying altered transmission of SNPs in HOX gene clusters (HOXA, HOXD) and IGFBP3 as potential risk factors for clubfoot (talipes equinovarus), a common congenital limb defect. Key findings include significant associations with rs3801776 in HOXA (p=0.004 discovery, p=0.028 validation), rs13223993 in IGFBP3 (p=0.003), and strong gene-gene interactions between HOX and apoptotic pathway genes (CASP3, CASP10, Bid, Apaf1), suggesting HOX and apoptotic perturbations affect limb and muscle development.

Traits studied:Clubfoot (talipes equinovarus)Congenital vertical talusIdiopathic clubfoot
Genetic and plasma variation of insulin‐like growth factor binding proteins in relation to prostate cancer incidence and survival
AssociationN=4,510Mattias Johansson et al.(2009)· The Prostate

Case-control study of 2,774 prostate cancer cases and 1,736 controls examining genetic variation in IGFBP1, IGFBP3, and IGFALS genes in relation to prostate cancer incidence and survival. The rs2854744 variant in IGFBP3 was associated with elevated total IGFBP3 plasma levels (P=9×10⁻⁸), and elevated intact IGFBP3 was associated with increased risk of prostate cancer-specific death (P=6×10⁻¹⁴ unadjusted, P=0.0004 adjusted). No clear associations were found between genetic variants and prostate cancer incidence or overall survival.

Traits studied:Prostate cancer incidenceProstate cancer survivalProstate cancer-specific death

About IGFBP3

This gene is a member of the insulin-like growth factor binding protein (IGFBP) family and encodes a protein with an IGFBP domain and a thyroglobulin type-I domain. The protein forms a ternary complex with insulin-like growth factor acid-labile subunit (IGFALS) and either insulin-like growth factor (IGF) I or II. In this form, it circulates in the plasma, prolonging the half-life of IGFs and altering their interaction with cell surface receptors. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. [provided by RefSeq, Jul 2008]

View all IGFBP3 variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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