rs3025035
This is a intron variant variant in the VEGFA gene.
▶Research that mentions this SNP (1)
▶Possible association between polymorphisms of human vascular endothelial growth factor A gene and susceptibility to glioma in a Chinese populationAssociationN=1,590Rui Li et al.(2011)· International Journal of Cancer
Case-control study of 766 glioma patients and 824 controls from a Chinese population investigating associations between 9 VEGFA gene polymorphisms and glioma risk. Three SNPs showed suggestive associations: rs2010963 (OR=1.29, 95% CI 1.04-1.58), rs3025030 (OR=2.21, 95% CI 1.18-4.14), and rs3024994 (protective, OR=0.66, 95% CI 0.47-0.94). A notable cumulative effect was observed with each additional adverse genotype increasing glioma risk 1.38-fold (p=8.4×10⁻⁵).
About VEGFA
This gene is a member of the PDGF/VEGF growth factor family. It encodes a heparin-binding protein, which exists as a disulfide-linked homodimer. This growth factor induces proliferation and migration of vascular endothelial cells, and is essential for both physiological and pathological angiogenesis. Disruption of this gene in mice resulted in abnormal embryonic blood vessel formation. This gene is upregulated in many known tumors and its expression is correlated with tumor stage and progression. Elevated levels of this protein are found in patients with POEMS syndrome, also known as Crow-Fukase syndrome. Allelic variants of this gene have been associated with microvascular complications of diabetes 1 (MVCD1) and atherosclerosis. Alternatively spliced transcript variants encoding different isoforms have been described. There is also evidence for alternative translation initiation from upstream non-AUG (CUG) codons resulting in additional isoforms. A recent study showed that a C-terminally extended isoform is produced by use of an alternative in-frame translation termination codon via a stop codon readthrough mechanism, and that this isoform is antiangiogenic. Expression of some isoforms derived from the AUG start codon is regulated by a small upstream open reading frame, which is located within an internal ribosome entry site. The levels of VEGF are increased during infection with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), thus promoting inflammation by facilitating recruitment of inflammatory cells, and by increasing the level of angiopoietin II (Ang II), one of two products of the SARS-CoV-2 binding target, angiotensin-converting enzyme 2 (ACE2). In turn, Ang II facilitates the elevation of VEGF, thus forming a vicious cycle in the release of inflammatory cytokines. [provided by RefSeq, Jun 2020]
View all VEGFA variants →Gene information from NCBI Gene. Variant classifications from ClinVar.
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