rs3130297

This is a intergenic variant variant.

GWAS Catalog Trait Associations (1)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

beta-1,4-glucuronyltransferase 1 measurement

Allele T
OR 0.08
p 6.0e-28
N 47,745
Large GWAS
European

Research that mentions this SNP (2)

Search for schizophrenia susceptibility variants at the HLA-DRB1 locus among a British population
AssociationN=487Lorna Halley et al.(2013)· Immunogenetics

A candidate gene association study of HLA-DRB1 tagging SNPs in schizophrenia among 332 British cases (219 male, 113 female; mean age 32-36 years) and 155 controls (mean age 40-42 years) recruited through family-based (132 trios, 92 duos) and case-control designs. The DRB1*1303 allele showed marginal protective association (OR=0.42, 95% CI 0.27-0.66, χ²=4.138, P=0.042), and rs424232 showed significant protective association with schizophrenia (OR=0.69, 95% CI 0.54-0.88, χ²=9.404, P=0.002). The authors failed to confirm association of candidate DRB1 risk alleles but noted the association signal may extend beyond the HLA locus toward the NOTCH4 gene.

Traits studied:Schizophrenia
Association analysis of ANK3 gene variants in nordic bipolar disorder and schizophrenia case–control samples
ReviewMartin Tesli et al.(2011)· American Journal of Medical Genetics Part B: Neuropsychiatric Genetics

This review comprehensively summarizes the latest genetic studies on schizophrenia, including family studies (heritability ~80%), genome-wide association studies, epigenetic mechanisms, candidate gene investigations, and next-generation sequencing findings. Key GWAS findings identified 108 schizophrenia-associated loci including variants in MIR137 (rs1625579), TCF4 (rs12966547), CSMD1 (rs10503253), CACNA1C (rs4765905), ANK3 (rs10761482), and MHC region variants, with evidence for polygenetic inheritance involving both common SNPs and rare copy number variations.

Traits studied:Auditory steady-state responseAutism spectrum disorderBipolar disorderCognitive impairmentMental retardationSchizophreniaSchizophrenia endophenotypesSchizophrenia with general psychopathologic symptomsSchizophrenia with negative symptomsSchizophrenia with positive symptomsSensory processing disorderTreatment-resistant schizophreniaUnipolar depression

This variant is in our database but has no known associations or PRS memberships yet.

Gene information from NCBI Gene. Variant classifications from ClinVar.

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