rs3218625

This is a protein-altering variant in the PTGS2 gene.

Research that mentions this SNP (3)

Genetic variation in the carbonyl reductase 3 gene confers risk of type 2 diabetes and insulin resistance: a potential regulator of adipogenesis
AssociationN=8,075Chang YC et al.(2012)· Journal of Molecular Medicine

This case-control association study identified rs10483032 in the CBR3 gene as associated with type 2 diabetes and insulin resistance in Chinese populations (combined OR = 1.29, 95% CI = 1.14-1.47, P < 0.0001). The association was replicated in multiple Chinese samples and validated in the FUSION GWAS. Functional studies demonstrated CBR3 expression increases during adipocyte differentiation, and CBR3 knockdown enhanced adipogenesis, suggesting the risk variant modulates type 2 diabetes susceptibility through effects on adipogenesis and insulin sensitivity.

Traits studied:Fasting glucoseFasting insulinHOMA-IRInsulin resistanceType 2 diabetes
Interaction of Cyclooxygenase‐2 promoter polymorphisms with Helicobacter pylori infection and risk of gastric cancer
ReviewN=1,320Xuemei Zhang et al.(2011)· Molecular Carcinogenesis

This review examines COX-2 (PTGS2) genetic variants and their association with gastric cancer susceptibility. Key variants include rs689466 (OR=1.19, p=0.002), rs20417 (OR=1.26, p<0.001), rs3218625 (OR=1.62, p=0.039), and rs5275 (OR=1.14, p=0.030), which increase gastric cancer risk through enhanced transcriptional activity or mRNA stability. The paper synthesizes data from multiple case-control studies and the authors' own analyses in Chinese populations (296-660 cases each), establishing COX-2 polymorphisms as potential biomarkers for cancer risk stratification.

Traits studied:Breast cancerColorectal cancerGastric cancerLung cancerPancreatic cancer
Cyclooxygenase‐2Gly587Arg variant is associated with differential enzymatic activity and risk of esophageal squamous‐cell carcinoma
AssociationN=2,296Dan Zhao et al.(2009)· Molecular Carcinogenesis

This case-control study identified a novel COX-2 exon 10 SNP (1759G>A, rs3218625) that causes a Gly587Arg amino acid substitution. Functional assays demonstrated that COX-2-587Arg has significantly higher enzymatic activity toward arachidonic acid (13.8 vs 11.2 U/mg, P=0.012). In 1,026 esophageal squamous-cell carcinoma patients and 1,270 controls, individuals carrying the 1759A allele had increased ESCC risk (OR=1.91, 95% CI=1.39-2.62, P<0.0001), with heterozygotes showing an OR of 1.87 (95% CI=1.36-2.57).

Traits studied:Esophageal squamous-cell carcinoma

About PTGS2

Prostaglandin-endoperoxide synthase (PTGS), also known as cyclooxygenase, is the key enzyme in prostaglandin biosynthesis, and acts both as a dioxygenase and as a peroxidase. There are two isozymes of PTGS: a constitutive PTGS1 and an inducible PTGS2, which differ in their regulation of expression and tissue distribution. This gene encodes the inducible isozyme. It is regulated by specific stimulatory events, suggesting that it is responsible for the prostanoid biosynthesis involved in inflammation and mitogenesis. [provided by RefSeq, Feb 2009]

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Gene information from NCBI Gene. Variant classifications from ClinVar.

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