rs3809128
This variant is located in the CNPY2 gene.
▶GWAS Catalog Trait Associations (4)
Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.
GWAS Catalog Trait Associations (4)
Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.
body height
Yengo L et al. “A saturated map of common genetic variants associated with human height.” Nature 610(7933):704-712 (2022)
Allele T
OR 0.11
p 4.0e-290
N 5,314,291
Large GWAS
European, Hispanic or Latin American, East Asian, African unspecified, South Asian
Sakaue S et al. “A cross-population atlas of genetic associations for 220 human phenotypes.” Nature Genetics 53(10):1415-1424 (2021)
Allele T
OR 0.07
p 6.0e-156
N 525,444
Large GWAS
multi-ancestry
Chiou JS et al. “Your height affects your health: genetic determinants and health-related outcomes in Taiwan.” Bmc Medicine 20(1):250 (2022)
Allele T
OR 0.11
p 6.0e-62
N 67,452
Large GWAS
East Asian
He M et al. “Meta-analysis of genome-wide association studies of adult height in East Asians identifies 17 novel loci.” Human Molecular Genetics 24(6):1791-800 (2015)
Allele T
OR 0.08
p 7.0e-35
N 36,227
Meta-analysisLarge GWAS
East Asian
body weight
Jee YH et al. “Genome-wide association studies in a large Korean cohort identify quantitative trait loci for 36 traits and illuminate their genetic architectures.” Nature Communications 16(1):4935 (2025)
Allele T
OR 0.03
p 5.0e-58
N 928,679
Large GWAS
multi-ancestry
Sakaue S et al. “A cross-population atlas of genetic associations for 220 human phenotypes.” Nature Genetics 53(10):1415-1424 (2021)
Allele T
OR 0.04
p 1.0e-32
N 525,535
Large GWAS
multi-ancestry
serum gamma-glutamyl transferase measurement
Jee YH et al. “Genome-wide association studies in a large Korean cohort identify quantitative trait loci for 36 traits and illuminate their genetic architectures.” Nature Communications 16(1):4935 (2025)
Allele T
OR 0.03
p 6.0e-29
N 928,679
Large GWAS
multi-ancestry
Kim YJ et al. “The contribution of common and rare genetic variants to variation in metabolic traits in 288,137 East Asians.” Nature Communications 13(1):6642 (2022)
Allele T
OR 0.02
p 5.0e-9
N 288,127
Large GWAS
East Asian
BMI-adjusted waist circumference
Wen W et al. “Genome-wide association studies in East Asians identify new loci for waist-hip ratio and waist circumference.” Scientific Reports 6:17958 (2016)
Allele C
OR 0.04
p 4.0e-9
N 44,609
Large GWAS
East Asian
About CNPY2
Predicted to be active in endoplasmic reticulum. [provided by Alliance of Genome Resources, Jul 2025]
View all CNPY2 variants →Gene information from NCBI Gene. Variant classifications from ClinVar.
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