rs4971099

This is a downstream gene variant variant in the TRIM46 gene.

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GWAS Catalog Trait Associations (10)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

lean body mass

Harris BHL et al. “New role of fat-free mass in cancer risk linked with genetic predisposition.” Scientific Reports 14(1):7270 (2024)
Allele G
OR 0.01
p 2.0e-15
N 337,739
Large GWAS
European

dental caries

Nogawa S et al. “Genome-wide association meta-analysis identifies two novel loci associated with dental caries.” Bmc Oral Health 24(1):1003 (2024)
Allele A
OR 7.87
p 4.0e-15
N 533,348
Meta-analysisLarge GWAS
multi-ancestry

dental caries, dentures

Shungin D et al. “Genome-wide analysis of dental caries and periodontitis combining clinical and self-reported data.” Nature Communications 10(1):2773 (2019)
Allele A
OR 0.02
p 7.0e-15
N 487,823
Large GWAS
multi-ancestry

health trait

Schoeler T et al. “Combining cross-sectional and longitudinal genomic approaches to identify determinants of cognitive and physical decline.” Nature Communications 16(1):4524 (2025)
Allele A
OR 0.01
p 1.0e-13
N 405,979
Large GWAS
European

dentures

Shungin D et al. “Genome-wide analysis of dental caries and periodontitis combining clinical and self-reported data.” Nature Communications 10(1):2773 (2019)
Allele A
OR 0.04
p 3.0e-13
N 461,031
Large GWAS
European

chymotrypsin-like protease CTRL-1 measurement

Loya H et al. “A scalable variational inference approach for increased mixed-model association power.” Nature Genetics 57(2):461-468 (2025)
Allele G
OR 0.04
p 4.0e-12
N 47,745
Large GWAS
European

vital capacity

Loya H et al. “A scalable variational inference approach for increased mixed-model association power.” Nature Genetics 57(2):461-468 (2025)
Allele G
OR 0.01
p 4.0e-12
N 394,642
Large GWAS
European

Calcium channel blocker use measurement

Sakaue S et al. “A cross-population atlas of genetic associations for 220 human phenotypes.” Nature Genetics 53(10):1415-1424 (2021)
Allele G
OR 0.07
p 3.0e-11
N 383,104
Large GWAS
multi-ancestry

forced expiratory volume

Schoeler T et al. “Combining cross-sectional and longitudinal genomic approaches to identify determinants of cognitive and physical decline.” Nature Communications 16(1):4524 (2025)
Allele A
OR 0.01
p 3.0e-11
N 373,397
Large GWAS
European

About TRIM46

This gene encodes a protein of the tripartite motif (TRIM) family. The TRIM motif includes zinc-binding domains, a RING finger region, a B-box motif and a coiled-coil domain. TRIM46 is reported to be involved in the proliferation of multiple types of cancer cells including lung and breast cancer. It has also been shown to control neuronal polarity and axon specification by forming uniform microtubule bundles in the axon. [provided by RefSeq, May 2022]

View all TRIM46 variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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