rs4986791
This is a variant in the TLR4 gene that changes a threonine to an isoleucine.
▶GWAS Catalog Trait Associations (2)
Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.
GWAS Catalog Trait Associations (2)
Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.
protein measurement
toll-like receptor 4:Lymphocyte antigen 96 complex amount
▶ClinVar annotation
COPD, severe early onset; TLR4 POLYMORPHISM
View on ClinVar →▶Research that mentions this SNP (13)
▶Association of Toll‐like 4 receptor gene polymorphism (rs4986790, rs4986791) with the risk of urinary tract infection: A systematic review and meta‐analysisMeta-analysisN=2,925Wen‐Lin Huang et al.(2020)· The Kaohsiung Journal of Medical Sciences
Meta-analysis of 10 case-control studies (1476 UTI cases, 1449 controls) examining TLR4 gene polymorphisms rs4986790 and rs4986791 in relation to urinary tract infection risk. Overall analysis found no significant association; however, in Asian populations, rs4986790 G allele showed significant increased UTI risk (OR=1.88, 95% CI: 1.42-2.49 in allelic model; OR=1.97, 95% CI: 1.46-2.66 in dominant model).
▶Correlation between TLR2,TLR3,TLR4, and TLR9 polymorphisms and susceptibility to and prognosis of severe hepatitis among the newbornsAssociationN=275Xiao Qiu et al.(2018)· Journal of Clinical Laboratory Analysis
This case-control study investigated the association between TLR2, TLR3, TLR4, and TLR9 polymorphisms and susceptibility to and prognosis of severe hepatitis among 135 newborn cases and 140 healthy controls of Chinese Han ethnicity. Certain SNPs were associated with disease risk and prognosis, including rs1898830 (TLR2; OR=0.38 for favorable prognosis in AG carriers), rs1879026 (TLR3; OR=0.29 for GT carriers), and rs187084 and rs352139 (TLR9). The haplotype A-C-G-G-C-A-T showed increased susceptibility (OR=4.11), while this haplotype was associated with favorable prognosis when present.
▶A genome-wide association study of severe teenage acne in European AmericansAssociationN=2,320Mingfeng Zhang et al.(2014)· Human Genetics
A genome-wide association study of 928 European Americans (81 cases with severe teenage acne, 847 controls) identified rs4133274 on chromosome 8q24 as significantly associated with severe teenage acne (OR=4.01, 95% CI=2.37-6.82, p=1.7×10⁻⁶), located 72 kb upstream of the MYC gene. The finding was not replicated in an independent cohort (n=1,392), but suggests a potential genetic link between acne and cancer risk through MYC-mediated androgen regulation.
▶Coding variants of TLR2 and TLR4 genes do not substantially contribute to prosthetic joint infectionAssociationN=539Frantisek Mrazek et al.(2013)· Inflammation Research
A case-control genetic association study of 350 Czech patients undergoing total joint arthroplasty (98 with prosthetic joint infection, 252 without) plus 189 healthy controls investigated whether coding variants TLR2 R753Q (rs5743708), TLR4 D299G (rs4986790), and TLR4 T399I (rs4986791) contribute to prosthetic joint infection susceptibility. No significant differences in genotype or allele frequencies were found between infection cases and controls (p > 0.05), suggesting these TLR variants do not substantially affect prosthetic joint infection risk.
▶Association of TLR4 gene non-missense single nucleotide polymorphisms with rheumatoid arthritis in Chinese Han populationAssociationN=460Hongju Yang et al.(2013)· Rheumatology International
This case-control association study examined four TLR4 non-missense SNPs in 213 Chinese Han RA patients versus 247 controls. The 3' UTR SNP rs41426344 showed significant association with rheumatoid arthritis (C allele: OR=5.22, P=0.001; CC genotype: OR=3.94, P=0.009), as did rs7873784 (C allele: OR=1.54, P=0.028). Haplotype analysis identified H11 (CCGG) as protective and H5/H13 as risk haplotypes. The study demonstrates ethnic-specific allele frequency variation and suggests regulatory region polymorphisms play a role in RA susceptibility.
▶The toll‐like receptor 2 (TLR2) ‐196 to ‐174 del/ins polymorphism affects viral loads and susceptibility to hepatocellular carcinoma in chronic hepatitis CReviewHans‐Dieter Nischalke et al.(2012)· International Journal of Cancer
A systematic literature review examining the association between toll-like receptor (TLR) single nucleotide polymorphisms and susceptibility to hepatitis B virus (HBV) and hepatitis C virus (HCV) infection, including disease progression to liver cirrhosis and hepatocellular carcinoma. The review identifies polymorphisms in TLR2, TLR3, TLR4, TLR5, TLR7, TLR8, and TLR9 genes that affect viral susceptibility and disease outcomes, with mechanisms involving altered gene expression and immune signaling.
▶Toll‐like receptor genes and their association with colon and rectal cancer development and prognosisAssociationN=6,174Martha L. Slattery et al.(2012)· International Journal of Cancer
Population-based case-control study examining genetic variation in toll-like receptor genes (TLR2, TLR3, TLR4) and colon/rectal cancer risk and survival. TLR3 rs11721827 was associated with rectal cancer (OR 1.27, 95% CI 1.02-1.58), while TLR3 rs3775292 and TLR4 rs11536898 were associated with colon cancer (OR 0.68 and 0.50, respectively). Significant interactions were observed with NSAID use, smoking, and dietary factors. TLR2 rs5743704 and rs5743708 were associated with worse colon cancer survival (HRR 1.89 and 1.74, respectively).
▶Confirmation of an association between single nucleotide polymorphisms in the VDR gene with respiratory syncytial virus related disease in South African ChildrenReviewKresfelder TL et al.(2011)· Journal of Medical Virology
This comprehensive review examines genetic polymorphisms in innate immune response genes that influence susceptibility to respiratory syncytial virus (RSV) infection and disease severity in children. The paper discusses key genes including TLR2, TLR3, TLR4, RIG-I, IL-8, RANTES/CCL5, NF-κB, AP-1, and vitamin D receptor (VDR), highlighting how SNPs such as TLR4 Asp299Gly and Thr399Ile, RANTES -28C/G, IL-8 -251T, and VDR FokI polymorphisms are associated with increased RSV susceptibility or protection in pediatric populations.
▶Genetic variants in TLR2 and TLR4 are associated with markers of monocyte activation: the Atherosclerosis Risk in Communities MRI StudyAssociationN=1,817Suzette J. Bielinski et al.(2011)· Human Genetics
This candidate gene study of 1,817 participants from the ARIC Carotid MRI cohort identified genetic variants associated with monocyte activation markers. TLR2 rs1816702 was associated with increased CD14+/TLR2+ monocyte levels in whites (p<0.001), while TLR4 rs5030719 was associated with CD14+/TLR4+ levels in blacks (p<0.001). MPO gene variants also showed modest associations with monocyte MPO levels, demonstrating population-specific genetic influences on immune cell surface receptor expression.
▶Functional linkage of cirrhosis‐predictive single nucleotide polymorphisms of toll‐like receptor 4 to hepatic stellate cell responses†‡FunctionalJinsheng Guo et al.(2009)· Hepatology
This functional study demonstrated that cirrhosis-protective TLR4 SNPs rs4986790 (D299G) and rs4986791 (T399I) dampen inflammatory signaling and sensitize hepatic stellate cells to apoptosis, reducing fibrogenic responses. Cells expressing these SNPs showed reduced LPS responsiveness, decreased NFκB activation, lower Bcl-2 levels, reduced growth (P<0.05), and greatly increased spontaneous apoptosis (P<0.01) compared to wild-type TLR4, providing mechanistic evidence for how these variants protect against hepatic fibrosis.
▶Association of p53 codon 72 polymorphism and MDM2 SNP309 with clinical outcome of advanced nonsmall cell lung cancerAssociationN=70Ji‐Youn Han et al.(2008)· Cancer
A case-control study of 70 Caucasian breast cancer patients examined 8 germline polymorphisms in genes involved in oxidative stress protection, apoptosis, and DNA repair (TP53, NQO1, IL6, TLR4, XRCC1) to predict response to neoadjuvant anthracycline-based chemotherapy. Good pathological response (pCR or residual isolated invasive tumor cells) was significantly more frequent in ER/PR-negative tumors (43.5% vs 10.3% in ER/PR-positive, p=0.006) and G3 tumors (42.4% vs 6.3% in G1/G2, p=0.002). A non-significant trend toward good response was observed in TP53 Arg72Pro carriers (Arg/Arg or Arg/Pro) versus Pro/Pro homozygotes (37.9% or 17.6% vs 0%, p=0.071), and XRCC1 Arg194Trp heterozygotes showed decreased overall survival (HR=6.649, p=0.041).
▶Genetic susceptibility has a more important role in pediatric-onset Crohnʼs disease than in adult-onset Crohnʼs diseaseAssociationN=1,071Lissy de Ridder et al.(2007)· Inflammatory Bowel Diseases
This case-control study examined the role of CARD15, TLR4, SLC22A4/5, and DLG5 polymorphisms in 103 pediatric-onset and 696 adult-onset inflammatory bowel disease (IBD) patients compared to 272 healthy controls. CARD15 3020insC homozygosity was significantly more common in pediatric-onset Crohn's disease (CD) versus adult-onset CD (4.2% vs 0.6%, RR 7.1, 95% CI 1.2-42.0, P=0.04). SLC22A4/5 rs3792876 was significantly associated with pediatric-onset CD (6.1% vs 1.1% in adult-onset CD, P=0.02). DLG5 rs2165047 was associated with perianal disease in pediatric CD patients (RR 2.4, 95% CI 1.4-4.0, P=0.003).
▶Relevance of Mutations in the TLR4 Receptor in Patients With Gram-Negative Septic ShockAssociationN=949Eva Lorenz et al.(2002)· Archives of Internal Medicine
This observational study of three cohorts (375 surgical patients, 159 ventilator-associated pneumonia patients, and 415 cardiac surgery patients) examined genetic variations in TLR4 (Asp299Gly/Thr399Ile, rs4986790 and rs4986791) and TIRAP/Mal (Ser180Leu, rs8177374) on sepsis susceptibility and cytokine response. Patients carrying mutations in both TLR4 and TIRAP/Mal showed significantly increased risk of severe infections (OR 5.5; P=0.02), as did TIRAP/Mal homozygous patients (OR 7.3; P<0.01), with reduced cytokine production in VAP patients but not in sterile inflammation.
About TLR4
The protein encoded by this gene is a member of the Toll-like receptor (TLR) family which plays a fundamental role in pathogen recognition and activation of innate immunity. TLRs are highly conserved from Drosophila to humans and share structural and functional similarities. They recognize pathogen-associated molecular patterns that are expressed on infectious agents, and mediate the production of cytokines necessary for the development of effective immunity. The various TLRs exhibit different patterns of expression. In silico studies have found a particularly strong binding of surface TLR4 with the spike protein of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the causative agent of Coronavirus disease-2019 (COVID-19). This receptor has also been implicated in signal transduction events induced by lipopolysaccharide (LPS) found in most gram-negative bacteria. Mutations in this gene have been associated with differences in LPS responsiveness, and with susceptibility to age-related macular degeneration. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Aug 2020]
View all TLR4 variants →Gene information from NCBI Gene. Variant classifications from ClinVar.
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