rs57467915

This variant is located in the ABCB6 gene.

GWAS Catalog Trait Associations (5)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

reticulocyte count

Vuckovic D et al. The Polygenic and Monogenic Basis of Blood Traits and Diseases. Cell 182(5):1214-1231.e11 (2020)
Allele A
OR 0.14
p 3.0e-49
N 408,112
Large GWAS
European
Allele A
OR 0.12
p 3.0e-49
N 394,642
Large GWAS
European
Allele A
OR 0.14
p 2.0e-20
N 170,690
Large GWAS
European

reticulocyte amount

Vuckovic D et al. The Polygenic and Monogenic Basis of Blood Traits and Diseases. Cell 182(5):1214-1231.e11 (2020)
Allele A
OR 0.13
p 2.0e-48
N 408,112
Large GWAS
European
Allele A
OR 0.11
p 2.0e-45
N 394,642
Large GWAS
European

Red cell distribution width

Allele G
OR 0.08
p 6.0e-23
N 531,774
Large GWAS
European
Vuckovic D et al. The Polygenic and Monogenic Basis of Blood Traits and Diseases. Cell 182(5):1214-1231.e11 (2020)
Allele G
OR 0.08
p 2.0e-20
N 408,112
Large GWAS
European
Allele G
OR 0.06
p 7.0e-16
N 394,642
Large GWAS
European

uroporphyrinogen-III synthase measurement

Allele A
OR 0.23
p 6.0e-19
N 47,745
Large GWAS
European

sex hormone-binding globulin measurement

Allele G
OR 0.02
p 4.0e-11
N 368,929
Large GWAS
European

ClinVar annotation

Benign★★★
5 submitters2 publications

not provided; Hereditary coproporphyria; Acute intermittent porphyria; Protoporphyria, erythropoietic, 1; Variegate porphyria

View on ClinVar →

About ABCB6

This gene encodes a member of the ATP-binding cassette (ABC) transporter superfamily. ABC proteins transport various molecules across extra- and intra-cellular membranes. This protein is a member of the heavy metal importer subfamily and plays a role in porphyrin transport. This gene is the molecular basis of the Langereis (Lan) blood group antigen and mutations in this gene underlie familial pseudohyperkalemia and dyschromatosis universalis hereditaria. [provided by RefSeq, Mar 2017]

View all ABCB6 variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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