rs6812193

This is a intron variant variant in the FAM47E gene.

GWAS Catalog Trait Associations (4)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

level of 11-beta-hydroxysteroid dehydrogenase 1 in blood

Allele T
OR 0.04
p 1.0e-14
N 47,745
Large GWAS
European

Parkinson disease

Allele C
OR 1.09
p 1.0e-14
N 417,508
Meta-analysisLarge GWAS
European
Allele C
OR 1.10
p 3.0e-11
N 108,990
Meta-analysisLarge GWAS
European
Allele C
OR 1.19
p 8.0e-10
N 33,050
Large GWAS
European

platelet count

Allele T
OR 0.02
p 6.0e-14
N 928,679
Large GWAS
multi-ancestry
Allele T
OR 0.01
p 1.0e-11
N 542,827
Large GWAS
European

testosterone measurement

Allele C
OR 0.02
p 2.0e-8
N 137,984
Major Consortium StudyLarge GWAS
multi-ancestry

Research that mentions this SNP (4)

SNCA rs356219 variant increases risk of sporadic Parkinson's disease in ethnic Chinese
AssociationN=145,932Nan‐Nan Li et al.(2013)· American Journal of Medical Genetics Part B: Neuropsychiatric Genetics

This is a German dissertation containing two peer-reviewed association studies on Parkinson's disease genetics. The first study found EIF4G1 is neither a strong nor common PD risk factor in European cohorts (2146 patients), with the p.Arg1205His variant showing no significant association (OR=1.3, p=0.50) in Icelandic population. The second study demonstrated heterozygous PARK2 CNV carriers have increased PD risk in Iceland (1415 cases vs 40474 controls, OR=1.7, p=0.03), supported by meta-analysis.

Traits studied:Parkinson's disease
SNCA: Major genetic modifier of age at onset of Parkinson's disease
AssociationN=145,900Kathrin Brockmann et al.(2013)· Movement Disorders

German doctoral dissertation investigating genetic risk factors for Parkinson's disease in the Icelandic population. The thesis comprises three studies: (1) Analysis of EIF4G1 gene mutations (p.Ala502Val, p.Arg1205His) in 2,146 European PD patients and 93,698 Icelandic samples showing EIF4G1 is neither a strong nor common risk factor; (2) Case-control study of PARK2 copy number variants in 1,415 PD patients versus 40,474 controls (≥65 years) demonstrating heterozygous PARK2 CNV carriers have significantly increased PD risk (OR=1.69, p=0.03); (3) Investigation of common genetic PD risk variants' effects on LRRK2 G2019S mutation carriers.

Traits studied:Idiopathic Parkinson's syndromeParkinson's disease
GWAS-linked GAK locus in Parkinson’s disease in Han Chinese and meta-analysis
AssociationN=1,574Nan-Nan Li et al.(2012)· Human Genetics

This case-control study in 1,574 Han Chinese subjects (812 PD patients, 762 controls) demonstrates that the rs1564282 variant in GAK is associated with increased Parkinson's disease risk (OR=1.34-1.59 depending on model, P=0.007-0.017). A meta-analysis combining this result with published data confirmed the association across populations (OR=1.31, 95% CI=1.19-1.44, P<0.00001), though clinical features and motor severity were similar between carriers and non-carriers.

Traits studied:Parkinson's disease
Clinical Features of Parkinson Disease Patients With Homozygous Leucine-Rich Repeat Kinase 2 G2019S Mutations
AssociationN=95,844Lianna Ishihara et al.(2006)· Archives of Neurology

Large European association study evaluating EIF4G1 mutations in Parkinson's disease across 2,146 PD patients and 93,698 Icelandic population samples. The p.Arg1205His variant (rs112176450) showed no significant association with PD risk (OR=1.3, p=0.50), and p.Ala502Val was not detected. The study concludes EIF4G1 is neither a strong nor common PD risk factor and should not be recommended for clinical diagnostic testing.

Traits studied:Familial Parkinson's diseaseParkinson's diseaseSporadic Parkinson's disease

About FAM47E

Enables enzyme activator activity. Involved in protein localization to chromatin and transcription initiation-coupled chromatin remodeling. Located in chromatin; cytoplasm; and nucleus. [provided by Alliance of Genome Resources, Jul 2025]

View all FAM47E variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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