rs70991108

This variant is located in the DHFR gene.

ClinVar annotation

Uncertain Significance★★★

Gastrointestinal stromal tumor

View on ClinVar →

Research that mentions this SNP (3)

Risk of retinoblastoma is associated with a maternal polymorphism in dihydrofolatereductase (DHFR) and prenatal folic acid intake
AssociationN=200Orjuela MA et al.(2012)· Cancer

This case-control study of 103 Mexican mothers of children with unilateral retinoblastoma and 97 control mothers found that maternal homozygosity for the DHFR 19bp deletion (rs70991108) was significantly associated with increased retinoblastoma risk (OR=3.78, 95% CI: 1.89-7.55; p=0.0002), even after adjusting for the child's genotype (OR=2.81, 95% CI: 1.32-5.99; p=0.0073). The association was stronger among mothers who took prenatal folic acid supplements (OR=3.58). Maternal MTHFR 677C>T polymorphism (rs1801133) was not associated with retinoblastoma risk.

Traits studied:Retinoblastoma
Association of the STAT4 gene with increased susceptibility for some immune‐mediated diseases
AssociationN=318Martínez A. et al.(2008)· Arthritis & Rheumatism

This pharmacogenetic study examined genetic variants in the folate metabolism and MTX transport pathways in rheumatoid arthritis patients receiving methotrexate monotherapy. Study 1 (n=124) identified rs17421511 and rs1476413 in MTHFR and rs1643650 in DHFR as significantly associated with MTX treatment response (p=0.024, p=0.0086, p=0.026 respectively), and rs16853826 and rs10197559 in ATIC as associated with toxicity (p=0.039). Study 2 (n=194) found rs10106 and rs10987742 in FPGS associated with response, and rs868755, rs10280623, rs1858923 in ABCB1 associated with toxicity, with rs10106 also associated with longer MTX monotherapy survival.

Traits studied:MTX monotherapy survivalMethotrexate responseMethotrexate toxicityRheumatoid arthritis
Replication of the tumor necrosis factor receptor−associated factor 1/complement component 5 region as a susceptibility locus for rheumatoid arthritis in a European family‐based study
AssociationN=318Kurreeman FA et al.(2008)· Arthritis & Rheumatism

This pharmacogenetics study analyzed 28 SNPs in methotrexate (MTX) metabolism genes (SLC19A1/RFC1, ABCB1, FPGS, GGH) in two Spanish populations with rheumatoid arthritis (n=124 and n=194). Key findings: FPGS rs10987742 and rs10106 associated with MTX response (p=0.033, p=0.041); FPGS rs10106 also associated with MTX survival (p=0.005) and toxicity (p=0.021); ABCB1 rs868755, rs10280623, rs1858923 associated with toxicity (p=0.025, p=0.048, p=0.031). In the first study, MTHFR rs17421511 (p=0.024) and rs1476413 (p=0.0086) associated with response, DHFR rs1643650 (p=0.026) associated with response, ATIC rs16853826 associated with toxicity (p=0.039).

Traits studied:Methotrexate responseMethotrexate survivalMethotrexate toxicityRheumatoid arthritis

About DHFR

Dihydrofolate reductase converts dihydrofolate into tetrahydrofolate, a methyl group shuttle required for the de novo synthesis of purines, thymidylic acid, and certain amino acids. While the functional dihydrofolate reductase gene has been mapped to chromosome 5, multiple intronless processed pseudogenes or dihydrofolate reductase-like genes have been identified on separate chromosomes. Dihydrofolate reductase deficiency has been linked to megaloblastic anemia. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2014]

View all DHFR variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

Community Wiki

No community notes yet for this variant. Sign in to start one.

Comments

Sign in to join the discussion.

Loading comments…

rs70991108 (DHFR) — Gene Wizard