rs710521

This is a regulatory region variant variant.

GWAS Catalog Trait Associations (1)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

urinary bladder carcinoma

Figueroa JD et al. Genome-wide association study identifies multiple loci associated with bladder cancer risk. Human Molecular Genetics 23(5):1387-98 (2014)
Allele A
OR 1.14
p 2.0e-11
N 6,206
Large GWAS
European
Allele A
OR 1.18
p 2.0e-10
N 8,652
Large GWAS
European

Research that mentions this SNP (3)

A functional variant in TP63 at 3q28 associated with bladder cancer risk by creating an miR‐140‐5p binding site
AssociationN=6,832Meilin Wang et al.(2016)· International Journal of Cancer

A three-stage fine mapping study of the 3q28 bladder cancer susceptibility locus identified rs35592567 in the 3'-UTR of TP63 as a functional causal variant. The T allele was significantly associated with decreased bladder cancer risk (OR=0.82, 95% CI=0.75-0.90, P=9.797×10⁻⁶). Functional studies showed the variant affects miR-140-5p binding, regulating TP63 post-transcriptional levels and affecting bladder cancer cell proliferation, migration, and invasion.

Traits studied:Bladder cancer
Genetic polymorphisms on 8q24.1 and 4p16.3 are not linked with urothelial carcinoma of the bladder in contrast to their association with aggressive upper urinary tract tumours
AssociationN=492David R. Yates et al.(2013)· World Journal of Urology

This case-control study of 231 bladder urothelial carcinoma (UC) patients and 261 benign controls found that rs9642880[T] and rs798766[T] variants increase bladder-UC risk (OR=1.72, p=0.028 and OR=1.84, p=0.01 respectively), but unlike upper tract UC, these variants are not associated with disease aggressiveness (grade or stage). The findings highlight distinct genetic differences between bladder-UC and upper urinary tract urothelial carcinoma.

Traits studied:Bladder urothelial carcinomaTumor aggressivenessTumor gradeTumor stageUpper urinary tract urothelial carcinoma
Rs710521[A] on chromosome 3q28 close to TP63 is associated with increased urinary bladder cancer risk
AssociationN=3,165Marie-Louise Lehmann et al.(2010)· Archives of Toxicology

A case-control study of 1,425 bladder cancer cases and 1,740 controls confirmed that rs710521[A] on chromosome 3q28 near TP63 is significantly associated with increased urinary bladder cancer risk (OR = 1.21 in unadjusted analysis, P = 0.011; OR = 1.23 in multivariate analysis adjusted for age, gender, smoking, and ethnicity, P = 0.010). Meta-analysis of 5,695 cases and 40,187 controls yielded a highly significant association (OR = 1.18, P < 0.0001), though the effect size is modest. No interaction was found with smoking or occupational exposure to bladder carcinogens.

Traits studied:Urinary bladder cancerUrothelial cancer

This variant is in our database but has no known associations or PRS memberships yet.

Gene information from NCBI Gene. Variant classifications from ClinVar.

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