rs7105934

This variant is located in the LINC02953 gene.

▶

GWAS Catalog Trait Associations (1)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

kidney cancer

Verma A et al. “Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program.” Science (new York, N.y.) 385(6706):eadj1182 (2024)
Allele G
OR 0.29
p 9.0e-15
N 449,557
Major Consortium StudyLarge GWAS
European
▶

Research that mentions this SNP (1)

▶
Comprehensive resequence analysis of a 123‐kb region of chromosome 11q13 associated with prostate cancer
AssociationN=84Charles C. Chung et al.(2012)· The Prostate

Comprehensive resequencing of a 122.9 kb region on chromosome 11q13.3 identified 644 polymorphic loci, including 166 novel variants not present in public databases. The study focused on fine-mapping prostate cancer susceptibility loci including rs10896438, rs12793759, rs10896449, and rs11228565, cataloguing 22-25 highly correlated surrogates (r² ≥ 0.8) for each locus and identifying functional regulatory elements. Indel polymorphisms comprised 13.4% of identified variants, with 58.5% novel to this study.

Traits studied:Prostate cancer
PubMedDOIMetascience Observatory

This variant is in our database but has no known associations or PRS memberships yet.

Gene information from NCBI Gene. Variant classifications from ClinVar.

Community Wiki

No community notes yet for this variant. Sign in to start one.

Comments

Sign in to join the discussion.

Loading comments…