rs71385734

This variant is located in the PKD1 gene.

GWAS Catalog Trait Associations (7)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

body height

Allele G
OR 0.02
p 5.0e-62
N 394,642
Large GWAS
European
Allele G
OR 0.03
p 3.0e-49
N 405,540
Large GWAS
European

whole body water mass

Allele G
OR 0.02
p 6.0e-39
N 394,642
Large GWAS
European

base metabolic rate measurement

Allele G
OR 0.02
p 4.0e-38
N 394,642
Large GWAS
European

lean body mass

Harris BHL et al. New role of fat-free mass in cancer risk linked with genetic predisposition. Scientific Reports 14(1):7270 (2024)
Allele G
OR 0.02
p 1.0e-30
N 337,739
Large GWAS
European

body weight

Allele G
OR 0.02
p 3.0e-28
N 394,642
Large GWAS
European

waist circumference

Allele G
OR 0.02
p 6.0e-22
N 394,642
Large GWAS
European

BMI-adjusted waist circumference

Allele G
OR 0.03
p 3.0e-15
N 186,825
Major Consortium StudyLarge GWAS
European

ClinVar annotation

Benign★★★
8 submitters1 publication

not specified; Polycystic kidney disease, adult type; Autosomal dominant polycystic kidney disease; Polycystic kidney disease; not provided

View on ClinVar →

About PKD1

This gene encodes a member of the polycystin protein family. The encoded glycoprotein contains a large N-terminal extracellular region, multiple transmembrane domains and a cytoplasmic C-tail. It is an integral membrane protein that functions as a regulator of calcium permeable cation channels and intracellular calcium homoeostasis. It is also involved in cell-cell/matrix interactions and may modulate G-protein-coupled signal-transduction pathways. It plays a role in renal tubular development, and mutations in this gene cause autosomal dominant polycystic kidney disease type 1 (ADPKD1). ADPKD1 is characterized by the growth of fluid-filled cysts that replace normal renal tissue and result in end-stage renal failure. Splice variants encoding different isoforms have been noted for this gene. Also, six pseudogenes, closely linked in a known duplicated region on chromosome 16p, have been described. [provided by RefSeq, Oct 2008]

View all PKD1 variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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