rs798766

This is a intron variant variant in the TACC3 gene.

GWAS Catalog Trait Associations (1)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

urinary bladder carcinoma

Figueroa JD et al. Genome-wide association study identifies multiple loci associated with bladder cancer risk. Human Molecular Genetics 23(5):1387-98 (2014)
Allele T
OR 1.22
p 7.0e-25
N 6,206
Large GWAS
European
Allele T
OR 1.24
p 1.0e-11
N 41,199
Large GWAS
European
Allele T
OR 1.20
p 4.0e-13
N 8,652
Large GWAS
European

Research that mentions this SNP (3)

Genetic–Epidemiological Evidence for the Role of Acetaldehyde in Cancers Related to Alcohol Drinking
ReviewEriksson CJ et al.(2015)· Advances in Experimental Medicine and Biology

This IARC Advisory Group report assesses carcinogenic hazards and recommends priorities for the IARC Monographs during 2020-2024. The document reviews over 170 candidate agents including chemicals, biological agents, and environmental exposures, evaluating evidence of carcinogenicity in humans, experimental animals, and mechanistic pathways. It identifies one genetic variant (rs798766 in TMEM129-TACC3-FGFR3) relevant to bladder cancer susceptibility in occupational settings, but this is cited literature rather than original findings.

Traits studied:Bladder cancerCarcinogenicity in humansColorectal cancerGastric cancerHead and neck cancerHepatocellular carcinomaOesophageal cancer
Genetic polymorphisms on 8q24.1 and 4p16.3 are not linked with urothelial carcinoma of the bladder in contrast to their association with aggressive upper urinary tract tumours
AssociationN=492David R. Yates et al.(2013)· World Journal of Urology

This case-control study of 231 bladder urothelial carcinoma (UC) patients and 261 benign controls found that rs9642880[T] and rs798766[T] variants increase bladder-UC risk (OR=1.72, p=0.028 and OR=1.84, p=0.01 respectively), but unlike upper tract UC, these variants are not associated with disease aggressiveness (grade or stage). The findings highlight distinct genetic differences between bladder-UC and upper urinary tract urothelial carcinoma.

Traits studied:Bladder urothelial carcinomaTumor aggressivenessTumor gradeTumor stageUpper urinary tract urothelial carcinoma
The association between bladder cancer and a single nucleotide polymorphism (rs2854744) in the insulin-like growth factor (IGF)-binding protein-3 (IGFBP-3) gene
AssociationN=486Mohammad Reza Safarinejad et al.(2011)· Archives of Toxicology

This Iranian case-control study examined the association between the IGFBP-3 A-202C polymorphism (rs2854744) and bladder cancer risk in 162 cancer patients and 324 controls. The study found that the AA genotype was protective against bladder cancer (OR=0.48, 95% CI 0.24-0.64, P=0.001) while the AC genotype increased risk (OR=1.76, 95% CI 1.27-2.84, P=0.038). The protective effect of the AA genotype was more pronounced in advanced bladder cancers, with no AA genotype carriers having high-grade tumors.

Traits studied:Bladder cancerTransitional cell carcinoma

About TACC3

This gene encodes a member of the transforming acidic colied-coil protein family. The encoded protein is a motor spindle protein that may play a role in stabilization of the mitotic spindle. This protein may also play a role in growth a differentiation of certain cancer cells. [provided by RefSeq, Nov 2011]

View all TACC3 variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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