rs8012

This is a downstream gene variant variant in the GCDH gene.

GWAS Catalog Trait Associations (10)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

metabolite measurement

Allele A
OR 0.32
p 8.0e-229
N 14,296
Large GWAS
European

glutarylcarnitine (C5-DC) measurement

Allele G
OR 0.39
p 9.0e-104
N 6,136
Large GWAS
European
Feofanova EV et al. Whole-Genome Sequencing Analysis of Human Metabolome in Multi-Ethnic Populations. Nature Communications 14(1):3111 (2023)
Allele G
OR 0.30
p 5.0e-92
N 10,604
Large GWAS
multi-ancestry
Allele G
OR 0.31
p 7.0e-96
N 8,238
Large GWAS
European
Allele G
OR 0.16
p 1.0e-53
N 4,960
Large GWAS
European

glutaroyl carnitine measurement

Shin SY et al. An atlas of genetic influences on human blood metabolites. Nature Genetics 46(6):543-550 (2014)
Allele A
OR 0.04
p 6.0e-45
N 7,701
Large GWAS
European

mean corpuscular hemoglobin

Vuckovic D et al. The Polygenic and Monogenic Basis of Blood Traits and Diseases. Cell 182(5):1214-1231.e11 (2020)
Allele G
OR 0.04
p 1.0e-44
N 408,112
Large GWAS
European
Allele G
OR 0.02
p 2.0e-10
N 172,332
Large GWAS
European

protein measurement

Pietzner M et al. Mapping the proteo-genomic convergence of human diseases. Science (new York, N.y.) 374(6569):eabj1541 (2021)
Allele A
OR 0.15
p 7.0e-31
N 10,708
Large GWAS
European

serum metabolite level

Allele A
OR 0.28
p 2.0e-30
N 3,926
Large GWAS
Hispanic or Latin American

retbindin measurement

Allele G
OR 0.06
p 2.0e-27
N 47,745
Large GWAS
European

erythrocyte count

Vuckovic D et al. The Polygenic and Monogenic Basis of Blood Traits and Diseases. Cell 182(5):1214-1231.e11 (2020)
Allele G
OR 0.02
p 1.0e-11
N 408,112
Large GWAS
European

erythrocyte volume

Vuckovic D et al. The Polygenic and Monogenic Basis of Blood Traits and Diseases. Cell 182(5):1214-1231.e11 (2020)
Allele G
OR 0.02
p 2.0e-11
N 408,112
Large GWAS
European
Allele G
OR 0.02
p 1.0e-10
N 172,433
Large GWAS
European

ClinVar annotation

Benign★★★
10 submitters1 publication

Elevated circulating glutaric acid concentration; Glutaric aciduria, type 1; not specified

View on ClinVar →

About GCDH

The protein encoded by this gene belongs to the acyl-CoA dehydrogenase family. It catalyzes the oxidative decarboxylation of glutaryl-CoA to crotonyl-CoA and CO(2) in the degradative pathway of L-lysine, L-hydroxylysine, and L-tryptophan metabolism. It uses electron transfer flavoprotein as its electron acceptor. The enzyme exists in the mitochondrial matrix as a homotetramer of 45-kD subunits. Mutations in this gene result in the metabolic disorder glutaric aciduria type 1, which is also known as glutaric acidemia type I. Alternative splicing of this gene results in multiple transcript variants. A related pseudogene has been identified on chromosome 12. [provided by RefSeq, Mar 2013]

View all GCDH variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

Community Wiki

No community notes yet for this variant. Sign in to start one.

Comments

Sign in to join the discussion.

Loading comments…