rs80338815
This is a splice region variant variant in the ARSA gene.
▶GWAS Catalog Trait Associations (1)
Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.
GWAS Catalog Trait Associations (1)
Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.
arylsulfatase A measurement
▶ClinVar annotation
ARSA-related disorder; Inborn genetic diseases; Intellectual disability; Metachromatic leukodystrophy (MLD); Metachromatic leukodystrophy, adult type; Metachromatic leukodystrophy, juvenile type; Neurodevelopmental disorder; See cases
View on ClinVar →▶Research that mentions this SNP (3)
▶NGS-Based Assay for the Identification of Individuals Carrying Recessive Genetic Mutations in Reproductive MedicineCase reportN=231Anna Abulí et al.(2016)· Human Mutation
A PhD thesis investigating the feasibility of implementing expanded preconception carrier screening (ECS) for 474 genes in Western Australia. A pilot study recruited 231 couples and screened 225, identifying 7 novel high-risk couples (1 in 32 couples, or 3.1%) who carry pathogenic variants in the same gene. Six of these high-risk couples had women carrying X-linked pathogenic variants, indicating carrier screening can effectively identify at-risk couples and facilitate informed reproductive decision-making through the public health system.
▶Identification of nine novel arylsulfatase a (ARSA) gene mutations in patients with metachromatic leukodystrophy (MLD)Case reportN=50Barry Eng et al.(2003)· Human Mutation
This paper reports the identification of nine novel ARSA (arylsulfatase A) gene mutations in metachromatic leukodystrophy (MLD) patients, including five missense mutations, three frameshift mutations, and one splice donor site mutation. The mutations were identified through allele-specific PCR assays and comprehensive nucleotide sequencing of the ARSA gene in over 50 MLD patients. These findings have facilitated carrier detection and prenatal diagnosis for at-risk MLD families.
▶Case reportN=21Unknown
This study screened the arylsulfatase A (ASA) gene in 21 metachromatic leukodystrophy (MLD) patients and identified 10 novel mutations, including 9 missense mutations and 1 eight-base-pair deletion in exon 1. The researchers characterized 32 out of 42 (76.2%) mutant alleles using allele-specific oligonucleotide hybridization, chemical mismatch cleavage, and DNA sequencing. Genotype-phenotype correlations revealed that mutations such as 459+1G→A, A314T, S95N, R244H, and R244C were associated with severe late-infantile MLD phenotypes, while P426L and R384C were associated with slower juvenile disease progression.
About ARSA
The protein encoded by this gene hydrolyzes cerebroside sulfate to cerebroside and sulfate. Defects in this gene lead to metachromatic leucodystrophy (MLD), a progressive demyelination disease which results in a variety of neurological symptoms and ultimately death. Alternatively spliced transcript variants have been described for this gene. [provided by RefSeq, Dec 2010]
View all ARSA variants →Gene information from NCBI Gene. Variant classifications from ClinVar.
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