rs9266271

This is a upstream gene variant variant in the HLA-B gene.

GWAS Catalog Trait Associations (7)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

monocyte count

Kachuri L et al. Genetic determinants of blood-cell traits influence susceptibility to childhood acute lymphoblastic leukemia. American Journal of Human Genetics 108(10):1823-1835 (2021)
Allele T
OR
p 8.0e-27
N 234,690
Large GWAS
European

BMI-adjusted waist-hip ratio

Allele C
OR 0.03
p 6.0e-18
N 219,872
Major Consortium StudyLarge GWAS
European

prostate specific antigen amount

Verma A et al. Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. Science (new York, N.y.) 385(6706):eadj1182 (2024)
Allele T
OR 0.03
p 1.0e-15
N 359,803
Major Consortium StudyLarge GWAS
multi-ancestry

BMI-adjusted waist circumference

Allele C
OR 0.02
p 2.0e-13
N 219,872
Major Consortium StudyLarge GWAS
European

BMI-adjusted hip circumference

Allele C
OR 0.02
p 1.0e-12
N 219,872
Major Consortium StudyLarge GWAS
European

prostate carcinoma

Verma A et al. Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. Science (new York, N.y.) 385(6706):eadj1182 (2024)
Allele T
OR 0.05
p 5.0e-12
N 573,692
Major Consortium StudyLarge GWAS
multi-ancestry

sex hormone-binding globulin measurement

Allele C
OR 0.47
p 1.0e-8
N 148,248
Major Consortium StudyLarge GWAS
European

About HLA-B

HLA-B belongs to the HLA class I heavy chain paralogues. This class I molecule is a heterodimer consisting of a heavy chain and a light chain (beta-2 microglobulin). The heavy chain is anchored in the membrane. Class I molecules play a central role in the immune system by presenting peptides derived from the endoplasmic reticulum lumen. They are expressed in nearly all cells. The heavy chain is approximately 45 kDa and its gene contains 8 exons. Exon 1 encodes the leader peptide, exon 2 and 3 encode the alpha1 and alpha2 domains, which both bind the peptide, exon 4 encodes the alpha3 domain, exon 5 encodes the transmembrane region and exons 6 and 7 encode the cytoplasmic tail. Polymorphisms within exon 2 and exon 3 are responsible for the peptide binding specificity of each class one molecule. Typing for these polymorphisms is routinely done for bone marrow and kidney transplantation. Hundreds of HLA-B alleles have been described. [provided by RefSeq, Jul 2008]

View all HLA-B variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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