ABCB1

ATP binding cassette subfamily B member 1

Pharmacogene

Summary

The membrane-associated protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the MDR/TAP subfamily. Members of the MDR/TAP subfamily are involved in multidrug resistance. The protein encoded by this gene is an ATP-dependent drug efflux pump for xenobiotic compounds with broad substrate specificity. It is responsible for decreased drug accumulation in multidrug-resistant cells and often mediates the development of resistance to anticancer drugs. This protein also functions as a transporter in the blood-brain barrier. Mutations in this gene are associated with colchicine resistance and Inflammatory bowel disease 13. Alternative splicing and the use of alternative promoters results in multiple transcript variants. [provided by RefSeq, Feb 2017]

Known Variants677 total

rsidPosition (GRCh37)AllelesClassClinVar
rs15848232367:87,133,135G/A—drug response
rs15848232407:87,133,138A/G—drug response
rs15848232447:87,133,139G/C—drug response
rs15848232547:87,133,165C/T—drug response
rs8873088197:87,133,180C/T—drug response
rs15848232907:87,133,196T/G—drug response
rs14141731647:87,133,261G/A—drug response
rs15848233687:87,133,287A/G—drug response
rs15848233777:87,133,292A/G—drug response
rs5497532907:87,133,336G/A—drug response
rs38427:87,133,366T/C3 prime UTR variantdrug response
rs15848234707:87,133,370T/G—drug response
rs15848234737:87,133,373T/A—drug response
rs15848234807:87,133,376C/A—drug response
rs12013552387:87,133,380T/G—drug response
rs15848234997:87,133,385G/A—drug response
rs15848235197:87,133,398C/G—drug response
rs15848235317:87,133,404C/T—drug response
rs15848235417:87,133,405T/C—drug response
rs15848235947:87,133,468C/G—drug response
rs170647:87,133,470T/A—drug response
rs15848236427:87,133,490T/G—drug response
rs15848236517:87,133,495C/G—drug response
rs15848236557:87,133,496T/G—drug response
rs7499040977:87,133,531A/C—drug response
rs15848237177:87,133,539A/G—drug response
rs2020266007:87,133,546A/G—drug response
rs15848237457:87,133,565G/A—drug response
rs1379969147:87,133,567G/T—uncertain significance
rs21170531607:87,133,576C/T—uncertain significance
rs14571915187:87,133,601A/T—drug response
rs14154475537:87,133,602T/G—drug response
rs15848238117:87,133,603A/C—drug response
rs7711007077:87,133,633G/A—uncertain significance
rs1494825367:87,133,634C/T—likely benign
rs15848238667:87,133,644T/C—drug response
rs283642747:87,133,651C/Tmissense variantbenign
rs13734557867:87,133,653C/T—drug response
rs22350517:87,133,655G/C—likely benign
rs2016099307:87,133,656C/T—drug response
rs2006371947:87,133,695G/Amissense variant—
rs5633753877:87,133,705G/A—uncertain significance
rs15848240097:87,133,711C/T—drug response
rs7573944987:87,133,714T/C—drug response
rs15848240607:87,133,723A/T—drug response
rs12817462647:87,133,729G/A—uncertain significance
rs13449720137:87,133,737C/G—uncertain significance
rs15848241317:87,133,753C/T—drug response
rs15848241537:87,133,759G/T—drug response
rs15848241597:87,133,761A/C—drug response
rs15848241827:87,133,776A/C—drug response
rs15848261857:87,135,183A/G—drug response
rs15848263107:87,135,248C/T—drug response
rs15848263497:87,135,278C/T—drug response
rs7644635837:87,135,295G/T—drug response
rs1996760987:87,135,302G/A—uncertain significance
rs14213519177:87,135,305G/A—drug response
rs15848264227:87,135,306T/G—drug response
rs15848264337:87,135,308T/A—drug response
rs15848264857:87,135,326G/A—drug response
rs15848265217:87,135,348A/T—drug response
rs15848265247:87,135,370G/A—drug response
rs15848266077:87,135,425G/A—drug response
rs15848266517:87,135,443T/G—drug response
rs7623746137:87,138,573A/G—drug response
rs12552168137:87,138,586C/T—drug response
rs10456427:87,138,645A/Gsynonymous variantdrug response
rs20325837:87,138,645G/Aintronic—
rs22291077:87,138,659A/Tmissense variantlikely benign
rs7735977577:87,138,668G/A—uncertain significance
rs347486557:87,138,684G/A—benign
rs7630917877:87,138,695C/T—uncertain significance
rs15848295687:87,138,703C/A—drug response
rs7582121807:87,138,707A/T—drug response
rs12534620047:87,138,710C/T—drug response
rs15848296027:87,138,725C/T—drug response
rs15848296087:87,138,728G/C—uncertain significance
rs14559496027:87,138,729G/C—drug response
rs357303087:87,138,758A/Gmissense variant—
rs558526207:87,138,760T/G—conflicting classifications of pathogenicity
rs12906871327:87,138,834G/A—drug response
rs610401227:87,138,847G/A—drug response
rs15848298517:87,138,851C/T—drug response
rs9493430487:87,138,858A/G—drug response
rs15848298727:87,138,863C/T—drug response
rs10022057:87,141,174G/T——
rs1914795697:87,141,310C/Tintron variant—
rs1417557207:87,144,515C/A—drug response
rs7462054987:87,144,520C/A—drug response
rs15848346177:87,144,545A/C—drug response
rs15848346237:87,144,548A/C—drug response
rs7768273287:87,144,552T/C—drug response
rs2005140287:87,144,582G/C—uncertain significance
rs13777954237:87,144,594C/T—drug response
rs15848347967:87,144,605C/T—drug response
rs3737898687:87,144,622C/G—drug response
rs15848348487:87,144,628A/C—drug response
rs3680962417:87,144,634C/T—drug response
rs7619142667:87,144,642C/A—drug response
rs15848348997:87,144,644T/C—drug response

Showing 100 of 677 variants. Use the SNP search for the full list.

Gene information from NCBI Gene. Variant classifications from ClinVar.