CDX1
caudal type homeobox 1
Summary
This gene is a member of the caudal-related homeobox transcription factor gene family. The encoded DNA-binding protein regulates intestine-specific gene expression and enterocyte differentiation. It has been shown to induce expression of the intestinal alkaline phosphatase gene, and inhibit beta-catenin/T-cell factor transcriptional activity. [provided by RefSeq, Jul 2008]
Known Variants26 total
| rsid | Position (GRCh37) | Alleles | Class | ClinVar |
|---|---|---|---|---|
| rs190594537 | 5:149,544,954 | C/T | upstream gene variant | — |
| rs2481330556 | 5:149,546,489 | C/A | — | uncertain significance |
| rs751367985 | 5:149,546,501 | C/T | — | uncertain significance |
| rs1761430878 | 5:149,546,551 | G/C | — | uncertain significance |
| rs1451375257 | 5:149,546,579 | G/C | — | uncertain significance |
| rs768800940 | 5:149,546,609 | C/T | — | uncertain significance |
| rs2481331073 | 5:149,546,655 | G/C | — | uncertain significance |
| rs1281958282 | 5:149,546,684 | C/T | — | uncertain significance |
| rs552110612 | 5:149,546,749 | C/T | — | uncertain significance |
| rs770982308 | 5:149,546,758 | C/T | — | uncertain significance |
| rs539576362 | 5:149,546,866 | G/A | — | uncertain significance |
| rs1025932686 | 5:149,546,869 | G/A | — | uncertain significance |
| rs2481331790 | 5:149,546,873 | G/A | — | uncertain significance |
| rs717746 | 5:149,556,558 | T/C | — | — |
| rs149474009 | 5:149,558,345 | G/A | intron variant | — |
| rs550378547 | 5:149,558,805 | G/A | — | — |
| rs141584861 | 5:149,559,123 | C/T | intron variant | — |
| rs760527166 | 5:149,562,331 | G/A | — | uncertain significance |
| rs1450652311 | 5:149,562,339 | C/T | — | uncertain significance |
| rs548360415 | 5:149,562,360 | G/A | — | uncertain significance |
| rs545571678 | 5:149,562,430 | G/T | — | uncertain significance |
| rs140956520 | 5:149,562,432 | C/T | — | uncertain significance |
| rs2481357154 | 5:149,563,131 | A/G | — | uncertain significance |
| rs757163745 | 5:149,563,170 | G/A | — | uncertain significance |
| rs1330612797 | 5:149,563,226 | G/A | — | uncertain significance |
| rs2481357544 | 5:149,563,228 | G/C | — | uncertain significance |
Gene information from NCBI Gene. Variant classifications from ClinVar.