CFAP69

cilia and flagella associated protein 69

Summary

Acts upstream of or within sperm axoneme assembly. Located in cytoplasm and sperm midpiece. Implicated in spermatogenic failure 24. [provided by Alliance of Genome Resources, Jul 2025]

Known Variants77 total

rsidPosition (GRCh37)AllelesClassClinVar
rs7549022617:89,874,732A/C—likely benign
rs5701553267:89,874,744G/C—uncertain significance
rs1490996977:89,874,762G/T—benign
rs178653237:89,874,774C/T—benign
rs3771262767:89,874,811A/C—likely benign
rs1920446217:89,879,653G/Aupstream gene variant—
rs1500006467:89,884,752A/G—likely benign
rs1452637217:89,884,782G/A—uncertain significance
rs24850129587:89,887,433C/G—uncertain significance
rs7477726797:89,887,442G/C—uncertain significance
rs7546738747:89,887,459G/C—uncertain significance
rs24850138887:89,887,475C/T—likely benign
rs5449537627:89,891,330C/A—uncertain significance
rs1512059717:89,891,331G/A—benign
rs7594380547:89,891,352A/G—uncertain significance
rs1383007557:89,900,853G/A—benign
rs9832443857:89,900,863T/C—uncertain significance
rs17999554377:89,900,901A/T—uncertain significance
rs2011086667:89,900,906T/C—uncertain significance
rs13552783727:89,900,954G/A—pathogenic
rs7810238297:89,900,956G/A—uncertain significance
rs102800537:89,901,039A/C—benign
rs5742115337:89,901,110T/C—uncertain significance
rs7578587877:89,901,121G/C—uncertain significance
rs15543595697:89,901,175C/T—pathogenic
rs15543596857:89,901,273G/A—pathogenic
rs178662237:89,903,356C/T—benign
rs7763681887:89,903,357G/A—uncertain significance
rs24853507347:89,906,551A/G—uncertain significance
rs7471428507:89,906,575A/G—uncertain significance
rs1871547727:89,906,600A/G—benign
rs37618057:89,906,609C/T—benign
rs7716929727:89,906,610G/A—likely benign
rs7760868897:89,906,632A/G—uncertain significance
rs17891913777:89,909,139T/C—uncertain significance
rs178659597:89,912,209C/T—benign
rs7515175667:89,912,251G/A—uncertain significance
rs7673473267:89,912,274C/T—uncertain significance
rs3687498227:89,912,275G/A—uncertain significance
rs10293657:89,912,301G/A—benign
rs7733175217:89,912,368T/C—uncertain significance
rs12520958187:89,915,649T/C—uncertain significance
rs12085645067:89,915,672C/T—uncertain significance
rs2003769127:89,915,680A/G—likely benign
rs1885341197:89,917,577C/T—benign
rs7781026887:89,917,581C/T—uncertain significance
rs24857331017:89,927,070A/G—uncertain significance
rs7651392147:89,927,107A/G—uncertain significance
rs7517637757:89,927,108A/T—uncertain significance
rs64652567:89,927,191T/A—benign
rs5314105897:89,929,211C/G—uncertain significance
rs7788643047:89,929,272A/G—likely benign
rs3750339847:89,929,331A/G—uncertain significance
rs7737015627:89,929,349C/T—uncertain significance
rs7757921017:89,933,371T/A—uncertain significance
rs24858580207:89,933,406T/C—uncertain significance
rs17932057827:89,933,412G/A—uncertain significance
rs9317326687:89,933,415A/G—uncertain significance
rs2004299697:89,934,060T/C—uncertain significance
rs24859137677:89,936,263T/A—uncertain significance
rs24859157297:89,936,347C/A—uncertain significance
rs5564557837:89,936,371G/A—uncertain significance
rs5746230227:89,936,380G/A—uncertain significance
rs3776984417:89,937,146C/A—uncertain significance
rs12608226827:89,937,154G/A—uncertain significance
rs78036207:89,938,588G/C—benign
rs7584668347:89,938,605T/C—uncertain significance
rs17940388637:89,938,643A/G—likely benign
rs1449809917:89,938,653A/G—likely benign
rs11349567:89,938,680T/C—benign
rs7633686937:89,939,403A/G—uncertain significance
rs1997688567:89,939,407T/G—likely benign
rs7676281347:89,939,414C/G—uncertain significance
rs1131025077:89,939,448G/A—uncertain significance
rs7475600617:89,939,452C/A—uncertain significance
rs14052779637:89,939,461C/T—uncertain significance
rs3764149017:89,939,548C/T—uncertain significance

Gene information from NCBI Gene. Variant classifications from ClinVar.