HOXA9
homeobox A9
Summary
In vertebrates, the genes encoding the class of transcription factors called homeobox genes are found in clusters named A, B, C, and D on four separate chromosomes. Expression of these proteins is spatially and temporally regulated during embryonic development. This gene is part of the A cluster on chromosome 7 and encodes a DNA-binding transcription factor which may regulate gene expression, morphogenesis, and differentiation. This gene is highly similar to the abdominal-B (Abd-B) gene of Drosophila. A specific translocation event which causes a fusion between this gene and the NUP98 gene has been associated with myeloid leukemogenesis. Read-through transcription exists between this gene and the upstream homeobox A10 (HOXA10) gene.[provided by RefSeq, Mar 2011]
Known Variants32 total
| rsid | Position (GRCh37) | Alleles | Class | ClinVar |
|---|---|---|---|---|
| rs7810502 | 7:27,203,139 | G/A | downstream gene variant | — |
| rs189587233 | 7:27,203,149 | G/C | downstream gene variant | — |
| rs778960235 | 7:27,203,255 | C/G | — | uncertain significance |
| rs145450895 | 7:27,203,269 | T/A | — | uncertain significance |
| rs750534571 | 7:27,203,319 | C/A | — | uncertain significance |
| rs140314505 | 7:27,203,328 | T/G | — | uncertain significance |
| rs2534760559 | 7:27,203,401 | T/G | — | uncertain significance |
| rs148367989 | 7:27,203,414 | C/T | — | benign |
| rs371046943 | 7:27,203,440 | G/A | — | uncertain significance |
| rs780692577 | 7:27,203,459 | A/T | — | uncertain significance |
| rs140596580 | 7:27,204,512 | G/T | — | uncertain significance |
| rs150410478 | 7:27,204,526 | C/T | — | uncertain significance |
| rs2534763592 | 7:27,204,556 | G/A | — | uncertain significance |
| rs769817684 | 7:27,204,607 | T/C | — | uncertain significance |
| rs569313107 | 7:27,204,664 | G/A | — | uncertain significance |
| rs2534764874 | 7:27,204,718 | G/T | — | uncertain significance |
| rs771025386 | 7:27,204,731 | G/T | — | uncertain significance |
| rs35355140 | 7:27,204,732 | C/T | synonymous variant | — |
| rs200486389 | 7:27,204,749 | A/G | — | uncertain significance |
| rs1000950303 | 7:27,204,781 | G/A | — | uncertain significance |
| rs1227989345 | 7:27,204,788 | G/A | — | uncertain significance |
| rs200385248 | 7:27,204,884 | C/T | — | uncertain significance |
| rs1783305776 | 7:27,204,892 | A/C | — | uncertain significance |
| rs2534766111 | 7:27,204,907 | T/C | — | uncertain significance |
| rs781090714 | 7:27,204,935 | G/T | — | uncertain significance |
| rs780077831 | 7:27,204,952 | G/C | — | uncertain significance |
| rs200958902 | 7:27,204,959 | G/C | — | uncertain significance |
| rs776933242 | 7:27,204,976 | G/A | — | uncertain significance |
| rs1339288093 | 7:27,204,980 | C/A | — | uncertain significance |
| rs762074015 | 7:27,204,998 | C/T | — | uncertain significance |
| rs1008316349 | 7:27,205,005 | C/G | — | uncertain significance |
| rs3801776 | 7:27,205,282 | A/G | regulatory region variant | — |
Gene information from NCBI Gene. Variant classifications from ClinVar.