rs10423674

This variant is located in the CRTC1 gene.

GWAS Catalog Trait Associations (1)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

age at menarche

Allele A
OR 0.04
p 9.0e-12
N 182,413
Large GWAS
European
Allele A
OR 2.30
p 6.0e-9
N 87,802
Meta-analysisLarge GWAS
European

Research that mentions this SNP (2)

Influence ofCRTC1Polymorphisms on Body Mass Index and Fat Mass in Psychiatric Patients and the General Adult Population
AssociationN=129,000Choong E. et al.(2013)· JAMA Psychiatry

This study examined CRTC1 polymorphisms and their association with body mass index (BMI) and fat mass in psychiatric patients and the general population. The rs3746266A>G variant was significantly associated with lower BMI in psychiatric patients (beta ≈ 1.81-3.87 kg/m², p<0.0001), with the strongest effect in women younger than 45 years. The proxy SNP rs6510997C>T showed associations with fat mass in a large population-based cohort (n=123,865, p=0.01).

Traits studied:Body Mass Index (BMI)Fat MassObesity
Associations of polymorphisms in the genes of FGFR2, FGF1, and RBFOX2 with breast cancer risk by estrogen/progesterone receptor status
AssociationN=2,416Yu‐Ling Cen et al.(2013)· Molecular Carcinogenesis

A hospital-based case-control study in rural and urban India (1,204 cases; 1,212 controls) examined genetic and lifestyle risk factors for breast cancer. Four SNPs in FGFR2 (rs1219648, rs2420946, rs2981575, rs2981582) showed positive associations with breast cancer (ORs 1.32-1.47). Additional SNPs in obesity and metabolic genes (rs374748 in FBN2, rs2922763 in HNF4G, rs2116830 in KCNMA1, rs11121832 in MTHFR, rs16886165 in MAP3K1, rs11594610 in TCF7L2, rs2274459 in MLN) were associated with increased breast cancer risk. Waist-to-hip ratio ≥0.95 showed strong association (OR 3.78; 95% CI 2.92-4.89), and women living first 20 years in rural areas showed protective effect (OR 0.77).

Traits studied:Breast cancerBreast cancer riskER+/PR+ breast cancerER/PR negative breast cancerTriple negative breast cancer

About CRTC1

Enables cAMP response element binding protein binding activity. Involved in positive regulation of transcription by RNA polymerase II. Located in cytosol; nuclear body; and plasma membrane. [provided by Alliance of Genome Resources, Jul 2025]

View all CRTC1 variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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