rs114247628

This is a upstream gene variant variant in the TMEM50A gene.

GWAS Catalog Trait Associations (5)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

erythrocyte volume

Allele A
OR 0.22
p 4.0e-66
N 394,642
Large GWAS
European

mean reticulocyte volume

Allele A
OR 0.20
p 5.0e-55
N 394,642
Large GWAS
European

reticulocyte amount

Vuckovic D et al. The Polygenic and Monogenic Basis of Blood Traits and Diseases. Cell 182(5):1214-1231.e11 (2020)
Allele A
OR 0.19
p 3.0e-37
N 408,112
Large GWAS
European
Allele A
OR 0.16
p 3.0e-33
N 394,642
Large GWAS
European

reticulocyte count

Vuckovic D et al. The Polygenic and Monogenic Basis of Blood Traits and Diseases. Cell 182(5):1214-1231.e11 (2020)
Allele A
OR 0.19
p 7.0e-37
N 408,112
Large GWAS
European
Allele A
OR 0.16
p 4.0e-34
N 394,642
Large GWAS
European

mean corpuscular hemoglobin concentration

Allele A
OR
p 1.0e-40
N 642,173
Large GWAS
multi-ancestry
Sakaue S et al. A cross-population atlas of genetic associations for 220 human phenotypes. Nature Genetics 53(10):1415-1424 (2021)
Allele A
OR 0.14
p 6.0e-17
N 485,950
Large GWAS
multi-ancestry
Vuckovic D et al. The Polygenic and Monogenic Basis of Blood Traits and Diseases. Cell 182(5):1214-1231.e11 (2020)
Allele A
OR 0.20
p 7.0e-23
N 408,112
Large GWAS
European
Allele A
OR 0.15
p 1.0e-23
N 394,642
Large GWAS
European

About TMEM50A

This gene is located in the RH gene locus, between the RHD and RHCE genes. The function of its protein product is unknown; however, its sequence has potential transmembrane domains suggesting that it may be an integral membrane protein. Its position between the RH genes suggests that polymorphisms in this gene may be tightly linked to RH haplotypes and may contribute to selective pressure for or against certain RH haplotypes. [provided by RefSeq, Jul 2008]

View all TMEM50A variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

Community Wiki

No community notes yet for this variant. Sign in to start one.

Comments

Sign in to join the discussion.

Loading comments…