rs11795343

This is a intron variant variant in the DDX58 gene.

GWAS Catalog Trait Associations (3)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

psoriasis

Allele T
OR 0.09
p 3.0e-16
N 472,819
Meta-analysisLarge GWAS
multi-ancestry
Allele T
OR 1.11
p 8.0e-11
N 33,394
Large GWAS
European
Allele T
OR 1.19
p 6.0e-9
N 12,244
Large GWAS
European

psoriasis, type 2 diabetes mellitus

Patrick MT et al. Causal Relationship and Shared Genetic Loci between Psoriasis and Type 2 Diabetes through Trans-Disease Meta-Analysis. The Journal of Investigative Dermatology 141(6):1493-1502 (2021)
Allele T
OR 1.07
p 1.0e-10
N 925,490
Meta-analysisLarge GWAS
European

high density lipoprotein cholesterol measurement

Allele C
OR 0.01
p 4.0e-8
N 1,320,016
Large GWAS
European

Research that mentions this SNP (1)

Rubella vaccine-induced cellular immunity: evidence of associations with polymorphisms in the Toll-like, vitamin A and D receptors, and innate immune response genes
AssociationN=714Inna G. Ovsyannikova et al.(2010)· Human Genetics

A candidate gene association study of 714 healthy children examined associations between 148 SNPs in innate immunity genes (TLR, vitamin A and D receptors, RIG-I pathway, TRIM factors) and rubella vaccine-induced cytokine responses. Twenty-two significant associations (P = 0.002–0.048) were found, including rs3740996 (His43Tyr) and rs10838525 (Gln136Arg) in TRIM5 with TNFα and IL-2/GM-CSF responses, and rs5743305 in TLR3 with GM-CSF secretion.

Traits studied:Rubella vaccine-induced cytokine responseRubella virus-specific GM-CSF secretionRubella virus-specific IFNγ secretionRubella virus-specific IL-10 secretionRubella virus-specific IL-12p40 secretionRubella virus-specific IL-2 secretionRubella virus-specific IL-4 secretionRubella virus-specific IL-5 secretionRubella virus-specific IL-6 secretionRubella virus-specific TNFα secretion

This variant is in our database but has no known associations or PRS memberships yet.

Gene information from NCBI Gene. Variant classifications from ClinVar.

Community Wiki

No community notes yet for this variant. Sign in to start one.

Comments

Sign in to join the discussion.

Loading comments…