rs139305134

This is a upstream gene variant variant in the SAFB2 gene.

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GWAS Catalog Trait Associations (1)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

level of 3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase FUT3 in blood, level of 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase FUT5 in blood

Loya H et al. “A scalable variational inference approach for increased mixed-model association power.” Nature Genetics 57(2):461-468 (2025)

Allele C

OR 0.50

p 3.0e-25

N 47,745

Large GWAS

European

About SAFB2

The protein encoded by this gene, along with its paralog (scaffold attachment factor B1), is a repressor of estrogen receptor alpha. The encoded protein binds scaffold/matrix attachment region (S/MAR) DNA and is involved in cell cycle regulation, apoptosis, differentiation, the stress response, and regulation of immune genes. [provided by RefSeq, May 2016]

View all SAFB2 variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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