rs150358287

This variant is located in the SIGLEC1 gene.

GWAS Catalog Trait Associations (8)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

sialoadhesin measurement

Allele A
OR 1.86
p 5.0e-73
N 2,893
Large GWAS
European

serum gamma-glutamyl transferase measurement

Allele A
OR 0.16
p 3.0e-44
N 928,679
Large GWAS
multi-ancestry
Sinnott-Armstrong N et al. Genetics of 35 blood and urine biomarkers in the UK Biobank. Nature Genetics 53(2):185-194 (2021)
Allele A
OR 0.12
p 5.0e-27
N 355,690
Major Consortium StudyLarge GWAS
multi-ancestry

collectin-12 measurement

Allele A
OR 1.13
p 6.0e-39
N 2,935
Large GWAS
Greater Middle Eastern (Middle Eastern, North African or Persian)

C-type lectin domain family 5 member A measurement

Allele A
OR 0.24
p 2.0e-26
N 47,745
Large GWAS
European

glutamate receptor ionotropic, delta-2 measurement

Pietzner M et al. Mapping the proteo-genomic convergence of human diseases. Science (new York, N.y.) 374(6569):eabj1541 (2021)
Allele A
OR 0.61
p 7.0e-25
N 10,708
Large GWAS
European

protocadherin alpha-4 measurement

Pietzner M et al. Mapping the proteo-genomic convergence of human diseases. Science (new York, N.y.) 374(6569):eabj1541 (2021)
Allele A
OR 0.61
p 2.0e-24
N 10,708
Large GWAS
European

killer cell lectin-like receptor subfamily F member 1 level

Allele A
OR 0.23
p 9.0e-20
N 47,745
Large GWAS
European

blood protein amount

Allele A
OR 0.68
p 3.0e-14
N 5,365
Large GWAS
European

ClinVar annotation

Benign☆☆☆
1 submitter
View on ClinVar →

About SIGLEC1

This gene encodes a member of the immunoglobulin superfamily. The encoded protein is a lectin-like adhesion molecule that binds glycoconjugate ligands on cell surfaces in a sialic acid-dependent manner. It is a type I transmembrane protein expressed only by a subpopulation of macrophages and is involved in mediating cell-cell interactions. The protein plays an important role in multiple human diseases and bacterial and viral infections has been shown to enhance SARS-CoV-2 infection. [provided by RefSeq, Dec 2021]

View all SIGLEC1 variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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