rs2023239

This is a 5 prime utr variant variant in the CNR1 gene.

Research that mentions this SNP (5)

Longitudinal predictors of cannabis use and dependence in offspring from families at ultra high risk for alcohol dependence and in control families
AssociationN=338Shirley Y. Hill et al.(2016)· American Journal of Medical Genetics Part B: Neuropsychiatric Genetics

A longitudinal prospective study of 338 young adult offspring from families at high and low risk for alcohol dependence examined predictors of cannabis use patterns and cannabis abuse/dependence from ages 8-30. A low P300 amplitude trajectory in childhood predicted cannabis abuse/dependence in males (P=0.01). A four-SNP ANKK1-DRD2 haplotype (rs4938012-rs4938015-rs1800497-rs6277, G-G-G-C) was significantly associated with cannabis use frequency patterns (P=0.0008). Among individuals with cannabis abuse/dependence, the CNR1 rs806368 A>G minor allele conferred a 5.4-fold increase in likelihood of frequent persistent use versus declining use (P=0.003, OR=5.4).

Traits studied:Cannabis abuseCannabis dependenceCannabis useSubstance use disorder
Evidence for association between polymorphisms in the cannabinoid receptor 1 (CNR1) gene and cannabis dependence
AssociationN=1,923Arpana Agrawal et al.(2009)· American Journal of Medical Genetics Part B: Neuropsychiatric Genetics

This association study examined polymorphisms in the cannabinoid receptor 1 (CNR1) gene and cannabis dependence in 1,923 individuals from the COGA family study. Two SNPs showed significant association with DSM-III-R cannabis dependence: rs806380 (p=0.009) and rs806368 (p=0.05), with rs806380 driving the haplotype association. Results support a role for CNR1 variation in cannabis dependence risk.

Traits studied:Alcohol dependenceCannabis dependenceCannabis use disordersSubstance use disorders
Cannabinoid Receptor 1 Gene Association With Nicotine Dependence
AssociationN=1,649Xiangning Chen et al.(2008)· Archives of General Psychiatry

This candidate gene association study tested the hypothesis that the cannabinoid receptor 1 (CNR1) gene is associated with nicotine dependence across two independent samples from the Mid-Atlantic Twin Registry. In the VAND sample (n=688), haplotype 1-1-2 of markers rs2023239-rs12720071-rs806368 showed female-specific association with nicotine dependence and smoking initiation (P<.001 for SI, P=.02 for ND). Replication in the VAANX sample (n=961) confirmed female-specific haplotype associations with FTND score (P=.009 for haplotype 1-1-2 of combination 7-9-10). The findings suggest sex-specific genetic effects of CNR1 variants on nicotine dependence risk.

Traits studied:Fagerström Test for Nicotine Dependence (FTND)Nicotine dependenceSmoking initiation
The Incentive Salience of Alcohol
FunctionalN=210Kent E. Hutchison et al.(2008)· Archives of General Psychiatry

This translational study examined the cannabinoid receptor 1 gene (CNR1) variant rs2023239 and its association with alcohol dependence across multiple levels of analysis. The C allele of rs2023239 was associated with greater CB1 receptor binding in the prefrontal cortex (F=9.62, P<0.01), greater alcohol cue-elicited brain activation in the midbrain and prefrontal cortex (P<0.05), increased subjective reward from alcohol consumption (F=6.27, P<0.05), and more positive treatment outcomes with olanzapine (a medication targeting mesocorticolimbic neurocircuitry). Strong correlations were found between cue-elicited brain activation and alcohol consumption measures in individuals carrying the C allele.

Traits studied:Alcohol dependenceAlcohol reward and cravingAlcohol use disorderSubstance abuse
Association study of the CNR1 gene exon 3 alternative promoter region polymorphisms and substance dependence
AssociationN=1,367Aryeh I. Herman et al.(2006)· American Journal of Medical Genetics Part B: Neuropsychiatric Genetics

This association study examined 4 SNPs (rs6928499, rs806379, rs1535255, rs2023239) in the CNR1 gene exon 3 alternative promoter region in 895 substance-dependent and 472 control subjects, attempting to replicate Zhang et al.'s earlier report of association with polysubstance abuse. A modest association was found for rs1535255 with alcohol dependence in European Americans (P=0.04), but this did not survive multiple testing correction. The study failed to replicate the original findings of association between these CNR1 markers and polysubstance dependence.

Traits studied:alcohol dependencecannabis dependencecocaine dependenceopioid dependencepolysubstance dependencesubstance dependence

About CNR1

This gene encodes one of two cannabinoid receptors. The cannabinoids, principally delta-9-tetrahydrocannabinol and synthetic analogs, are psychoactive ingredients of marijuana. The cannabinoid receptors are members of the guanine-nucleotide-binding protein (G-protein) coupled receptor family, which inhibit adenylate cyclase activity in a dose-dependent, stereoselective and pertussis toxin-sensitive manner. The two receptors have been found to be involved in the cannabinoid-induced CNS effects (including alterations in mood and cognition) experienced by users of marijuana. Multiple transcript variants encoding two different protein isoforms have been described for this gene. [provided by RefSeq, May 2009]

View all CNR1 variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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