rs2389858

GWAS Catalog Trait Associations (11)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

Dickkopf-related protein 3 measurement

Allele A
OR 0.06
p 2.0e-29
N 47,745
Large GWAS
European

cholesterol to total lipids in IDL percentage

Zoodsma M et al. A genetic map of human metabolism across the allele frequency spectrum. Nature Genetics 57(10):2445-2455 (2025)
Allele A
OR 0.02
p 4.0e-26
N 450,015
Large GWAS
multi-ancestry

triglycerides to total lipids in IDL percentage

Zoodsma M et al. A genetic map of human metabolism across the allele frequency spectrum. Nature Genetics 57(10):2445-2455 (2025)
Allele A
OR 0.02
p 2.0e-22
N 450,015
Large GWAS
multi-ancestry

appendicular lean mass

Allele A
OR 0.02
p 2.0e-18
N 450,243
Major Consortium StudyLarge GWAS
European

cholesteryl esters to total lipids in IDL percentage

Zoodsma M et al. A genetic map of human metabolism across the allele frequency spectrum. Nature Genetics 57(10):2445-2455 (2025)
Allele A
OR 0.02
p 7.0e-18
N 450,015
Large GWAS
multi-ancestry

cholesteryl esters to total lipids in very small VLDL percentage

Zoodsma M et al. A genetic map of human metabolism across the allele frequency spectrum. Nature Genetics 57(10):2445-2455 (2025)
Allele A
OR 0.02
p 2.0e-17
N 450,015
Large GWAS
multi-ancestry

triglycerides to total lipids in medium LDL percentage

Zoodsma M et al. A genetic map of human metabolism across the allele frequency spectrum. Nature Genetics 57(10):2445-2455 (2025)
Allele A
OR 0.02
p 6.0e-15
N 450,015
Large GWAS
multi-ancestry

total cholesterol measurement

Allele A
OR 0.01
p 2.0e-13
N 928,679
Large GWAS
multi-ancestry
Sakaue S et al. A cross-population atlas of genetic associations for 220 human phenotypes. Nature Genetics 53(10):1415-1424 (2021)
Allele A
OR 0.01
p 6.0e-9
N 480,086
Large GWAS
multi-ancestry

This variant is in our database but has no known associations or PRS memberships yet.

Gene information from NCBI Gene. Variant classifications from ClinVar.

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