rs6590330
This variant is located in the LOC124902789 gene.
▶GWAS Catalog Trait Associations (1)
Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.
GWAS Catalog Trait Associations (1)
Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.
systemic lupus erythematosus
Han JW et al. “Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus.” Nature Genetics 41(11):1234-7 (2009)
Allele A
OR 1.37
p 2.0e-25
N 2,252
Large GWAS
East Asian
Yang W et al. “Meta-analysis followed by replication identifies loci in or near CDKN1B, TET3, CD80, DRAM1, and ARID5B as associated with systemic lupus erythematosus in Asians.” American Journal of Human Genetics 92(1):41-51 (2013)
Allele A
OR 1.51
p 3.0e-8
N 5,050
Meta-analysis
multi-ancestry
Zhang YM et al. “Shared genetic study gives insights into the shared and distinct pathogenic immunity components of IgA nephropathy and SLE.” Molecular Genetics and Genomics : Mgg 296(4):1017-1026 (2021)
Allele A
OR —
p 3.0e-8
N 4,049
Large GWAS
East Asian
This variant is in our database but has no known associations or PRS memberships yet.
Gene information from NCBI Gene. Variant classifications from ClinVar.
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