rs6682862

GWAS Catalog Trait Associations (23)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

acid sphingomyelinase-like phosphodiesterase 3a measurement

Allele A
OR 0.05
p 5.0e-18
N 47,745
Large GWAS
European

alkaline phosphatase measurement

Sakaue S et al. A cross-population atlas of genetic associations for 220 human phenotypes. Nature Genetics 53(10):1415-1424 (2021)
Allele A
OR 0.02
p 1.0e-16
N 463,178
Large GWAS
multi-ancestry
Allele A
OR 7.61
p 3.0e-14
N 390,964
Large GWAS
multi-ancestry

serum gamma-glutamyl transferase measurement

Allele G
OR 0.01
p 1.0e-16
N 437,194
Large GWAS
European

alpha-L-iduronidase measurement

Allele A
OR 0.05
p 2.0e-16
N 47,745
Large GWAS
European

total lipids in large HDL

Zoodsma M et al. A genetic map of human metabolism across the allele frequency spectrum. Nature Genetics 57(10):2445-2455 (2025)
Allele A
OR 0.02
p 5.0e-16
N 450,015
Large GWAS
multi-ancestry

level of apolipoprotein A-II in blood

Allele A
OR 0.06
p 1.0e-15
N 47,745
Large GWAS
European

phospholipids:total lipids ratio

Zoodsma M et al. A genetic map of human metabolism across the allele frequency spectrum. Nature Genetics 57(10):2445-2455 (2025)
Allele A
OR 0.02
p 5.0e-15
N 450,015
Large GWAS
multi-ancestry

cholesterol to total lipids in large HDL percentage

Zoodsma M et al. A genetic map of human metabolism across the allele frequency spectrum. Nature Genetics 57(10):2445-2455 (2025)
Allele A
OR 0.02
p 2.0e-13
N 450,015
Large GWAS
multi-ancestry

cholesteryl esters to total lipids in large HDL percentage

Zoodsma M et al. A genetic map of human metabolism across the allele frequency spectrum. Nature Genetics 57(10):2445-2455 (2025)
Allele A
OR 0.02
p 3.0e-13
N 450,015
Large GWAS
multi-ancestry

cholesterol to total lipids in medium VLDL percentage

Zoodsma M et al. A genetic map of human metabolism across the allele frequency spectrum. Nature Genetics 57(10):2445-2455 (2025)
Allele A
OR 0.02
p 5.0e-13
N 450,015
Large GWAS
multi-ancestry

This variant is in our database but has no known associations or PRS memberships yet.

Gene information from NCBI Gene. Variant classifications from ClinVar.

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