rs6795735

This is a intron variant variant in the ADAMTS9-AS2 gene.

GWAS Catalog Trait Associations (8)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

diastolic blood pressure

Allele T
OR 0.15
p 8.0e-18
N 1,028,980
Large GWAS
multi-ancestry
Allele T
OR 0.16
p 1.0e-11
N 321,262
Large GWAS
multi-ancestry

type 2 diabetes mellitus

Allele T
OR 0.06
p 2.0e-14
N 659,316
Large GWAS
multi-ancestry
Allele T
OR 1.08
p 7.0e-11
N 69,033
Large GWAS
multi-ancestry

waist-hip ratio

Allele C
OR
β 0.030
p 1.0e-13
N 77,167
Meta-analysisLarge GWAS
European

glucose measurement

Verma A et al. Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. Science (new York, N.y.) 385(6706):eadj1182 (2024)
Allele C
OR 0.02
p 3.0e-13
N 601,111
Major Consortium StudyLarge GWAS
multi-ancestry

type 2 diabetes nephropathy

Verma A et al. Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. Science (new York, N.y.) 385(6706):eadj1182 (2024)
Allele C
OR 0.06
p 2.0e-11
N 439,106
Major Consortium StudyLarge GWAS
European

age-related macular degeneration

Fritsche LG et al. Seven new loci associated with age-related macular degeneration. Nature Genetics 45(4):433-9, 439e1-2 (2013)
Allele T
OR 1.10
p 5.0e-9
N 59,494
Large GWAS
multi-ancestry

systolic blood pressure

Allele C
OR 0.33
p 3.0e-8
N 99,785
Large GWAS
multi-ancestry

carotid artery thickness

Allele C
OR 0.04
p 1.0e-10
N 45,185
Meta-analysisLarge GWAS
multi-ancestry

ClinVar annotation

not_provided
1 submitter
View on ClinVar →

Research that mentions this SNP (3)

Association of the LINGO2-related SNP rs10968576 with body mass in a cohort of elderly Swedes
AssociationN=949Mathias Rask-Andersen et al.(2015)· Molecular Genetics and Genomics

Association study of 35 GWAS-identified body mass SNPs in 949 elderly Swedish participants (mean age 70-75 years). Significant association found between rs10968576 (LINGO2, intron 4) and BMI with a larger effect size (β = 0.69 kg/m²) than reported in younger populations, suggesting age-specific genetic effects on body mass in the elderly.

Traits studied:Body Mass IndexBody adiposityObesityOverweight
Associations of polymorphisms in the genes of FGFR2, FGF1, and RBFOX2 with breast cancer risk by estrogen/progesterone receptor status
AssociationN=2,416Yu‐Ling Cen et al.(2013)· Molecular Carcinogenesis

A hospital-based case-control study in rural and urban India (1,204 cases; 1,212 controls) examined genetic and lifestyle risk factors for breast cancer. Four SNPs in FGFR2 (rs1219648, rs2420946, rs2981575, rs2981582) showed positive associations with breast cancer (ORs 1.32-1.47). Additional SNPs in obesity and metabolic genes (rs374748 in FBN2, rs2922763 in HNF4G, rs2116830 in KCNMA1, rs11121832 in MTHFR, rs16886165 in MAP3K1, rs11594610 in TCF7L2, rs2274459 in MLN) were associated with increased breast cancer risk. Waist-to-hip ratio ≥0.95 showed strong association (OR 3.78; 95% CI 2.92-4.89), and women living first 20 years in rural areas showed protective effect (OR 0.77).

Traits studied:Breast cancerBreast cancer riskER+/PR+ breast cancerER/PR negative breast cancerTriple negative breast cancer
Association studies of novel obesity-related gene variants with quantitative metabolic phenotypes in a population-based sample of 6,039 Danish individuals
AssociationN=6,039Burgdorf KS et al.(2012)· Diabetologia

This association study investigates 18 BMI-associated and 14 WHR-associated gene variants identified by prior GWAS in 6,039 Danish individuals from the Inter99 cohort. The study found that QPCTL rs2287019 C allele was associated with increased insulinogenic index (7.4%, p=4.0×10⁻⁷) and disposition index (5.6%, p=6.4×10⁻⁵), while LRP1B rs2890652 C allele was associated with insulin resistance (3.3% increase in HOMA-IR, p=0.0011). For WHR variants, LYPLAL1/SLC30A10 rs4846567 G allele carriers showed improved insulin sensitivity (5.2% lower HOMA-IR in women, p=0.00086), whereas VEGFA rs6905288 A allele carriers showed insulin resistance in women (3.7% increase in HOMA-IR, p=0.00036).

Traits studied:BIGTT-AIR (Beta Cell Function)Body Mass Index (BMI)Disposition IndexFasting Plasma GlucoseFasting Serum InsulinHOMA-IR (Insulin Resistance)Insulinogenic IndexMatsuda Index (Insulin Sensitivity)Waist-Hip Ratio (WHR)

About ADAMTS9-AS2

Implicated in diabetic retinopathy. [provided by Alliance of Genome Resources, Jul 2025]

View all ADAMTS9-AS2 variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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